Solanum lycopersicum (tomato): 101245927
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Entry
101245927 CDS
T02665
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial-like isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
101245927
Enzymes [BR:
sly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
101245927
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
101245927
Prokaryotic type
101245927
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GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B_2
Lactamase_B
FCD
Motif
Other DBs
NCBI-GeneID:
101245927
NCBI-ProteinID:
XP_004252351
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All DBs
Position
12:61264743..61271360
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AA seq
828 aa
AA seq
DB search
MGKKRKRRAEGNHSNDKPKKNPLPEEDELKKTGNNKSYIQILGNGMDTQDTSPSVLLFSD
KWRFLFNAGEGLQRFLTEHKITLSQIDHIFLSRVCSETVGGLPGLLLTLAGMGKEGMSVN
VSGPPDLYLLVKAMESFIPNSAMGQIDSVLRNGSDEVASASSSKFDRLFAPITDGVVKLS
AVLVPPCCLKVCGSMKEGSSETNTPLISGSHLAEDLQAQWMNLTAEVELNPGELSVVYIC
EFPEIKGKFYPDKAAALGVEPGPKYGQLQRGNSVESDHQNIIVHPCDVMEPSTHGPIVLL
VDCPTPSHLQELSSLQSLTPFYSNISGQPVELCKKVNCLIHLSPVSVTNTPAYEQWMARF
GEAHHIMARHEPKNIEIPILKSSSRIAARLNYFCPQLFPSPGFWSLQQLKSLPSISKFPR
ELSLPTSCQITYAENLLKFHLLPYKELGLDNSNVPATISRTEILNELTSNIPEIISASEH
ISQLWHGNNGIVEELQLHETPLPSCLEGITREDMEIVFLGTGSSQPSKYRNVSSIFINLF
LNGSILLDCGEGTLGQLKRRFGVEGADEAVKGLKCIWISHIHADHHAGVARILALRHDLL
SGTPHEPLIVVGPRQLEIFLDRYQMLEELDMQFLDCRDTTESSWEAFESNDDNDANGSTS
RLKNLLRQAGLMTLISVPVIHCPQAYGIVLKFADRTNVIGKKIPGWKIVYSGDTRPCPEL
VKASREATLLIHEATFEDGMLEEAIAKNHSTMGEAIEAGDAAGAYRVILTHFSQRYPKIP
VFDGTYMHKACIAFDLMSVNLADLPILPSVVPYLKLLFPDEMSINEAD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagaggaaaagaagggctgagggtaatcatagtaatgacaagccgaagaaa
aaccctctaccggaagaagacgagctcaaaaaaactggtaataacaagtcatatatacag
atcctaggaaatggcatggatactcaagatacatcaccctctgtcctcctcttttcggac
aaatggaggtttttatttaacgcgggagaaggattgcaacgcttcttgacagagcataaa
attacattgtcacagattgatcacatatttctatcacgtgtctgctcagaaactgttggt
ggactcccaggtctcctattgactttggctgggatgggaaaagaagggatgtcagtaaat
gtatcgggtcctccggatctttatctattggttaaagcaatggaatcattcatcccaaat
tctgccatgggtcaaatagatagtgttctccgtaatggatcagatgaagttgctagcgct
tcttcaagtaagtttgatcgtctttttgctcccattactgatggagttgtcaaactatcg
gctgttctcgtgccaccatgttgcttgaaagtgtgtggctcaatgaaggaaggatcctct
gagacaaacactccactaattagtggtagtcatttagctgaagaccttcaagcacaatgg
atgaatctcacagctgaagtggaattaaatcctggtgagctttcggtggtttatatttgt
gagtttccggagatcaaagggaagttctatccagataaggctgctgctctcggagtggaa
cctgggccaaaatatggtcaattgcaaagagggaattcggtggagtcagatcatcaaaat
atcatagttcacccttgcgatgttatggagccttccactcacggtcctattgtgctcctt
gttgactgtccaacaccatctcatctgcaagagttgtcatctttgcagtctcttactccg
ttttactcgaatatatcaggacaacctgtcgaactgtgcaaaaaagtaaattgtttgata
caccttagccctgtgtcagtaacaaatacacccgcgtatgagcaatggatggccagattt
ggtgaagcccatcacataatggcacgacatgagccgaagaatattgagattccaattctg
aaatccagttcaagaattgctgcaagacttaactacttctgtcctcaattatttccttct
cctggtttttggtctcttcagcaattgaagagcttaccatcaatctcaaagttcccgagg
gagttgtcacttccaacttcatgtcagatcacttatgcagagaacctcctcaagttccat
cttcttccatacaaagagcttggattagacaattctaatgttcctgctactatttctcgg
acagaaatcttaaatgagctaacttcgaatattccagaaattataagtgcttctgaacat
attagccaactctggcatgggaacaatggaatagttgaagagctacagttgcatgaaact
ccattaccgagctgtttggaaggtataacaagagaagatatggagatagtttttctcgga
actggttcatcgcagccttcaaaataccgaaatgttagttctatatttattaatcttttc
ttaaatggaagtattttgttagattgtggtgaaggaacactgggacaactaaaaagaaga
tttggtgttgaaggtgctgatgaagcagtgaagggtttaaaatgtatttggatttctcat
attcatgcagatcatcatgcgggagttgcaagaattcttgctctgagacatgatttactc
agtggaactccccacgaacctttaattgttgtaggtcctcggcaacttgaaatatttctt
gataggtaccaaatgctcgaggaactagatatgcagttccttgattgtagggatactaca
gaatcttcatgggaggcttttgagtcaaatgatgataatgatgctaatgggagcacaagc
aggctaaagaacctgctcagacaagcaggattgatgactttgattagtgttcccgttatt
cattgtccacaagcttatggaatcgtcctgaagtttgctgataggactaatgttattggg
aagaaaataccaggttggaagattgtttactctggtgacacaaggccttgtccagaattg
gttaaagcctctcgcgaggcaacgcttctcatacatgaggctacttttgaagatggcatg
ttggaagaggctatagcaaaaaatcacagcacaatgggggaagctattgaggctggggac
gctgctggagcataccgcgtcatcctcactcacttcagccaaagataccctaaaatccca
gtatttgatggaacatacatgcacaaagcatgcattgcttttgatctgatgagtgttaac
ttggctgatctgcccattcttccaagtgttgttccatatcttaaactcttatttcctgat
gaaatgtctatcaatgaagctgattga
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