Solanum lycopersicum (tomato): 101246010
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Entry
101246010 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101246010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101246010
DNA repair and recombination proteins [BR:
sly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101246010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
ZSWIM1-3_C
OmpH
Agenet
Motif
Other DBs
NCBI-GeneID:
101246010
NCBI-ProteinID:
XP_004232862
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All DBs
Position
2:complement(59281401..59286547)
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AA seq
907 aa
AA seq
DB search
MNLFNFNCKCKSNNFFSIHLPPPHSSLCNRRTTRFSVRFSSESTHRVKLAESLQSETLKL
LEWPAVCQQLSAFTSTSMGYAAAQSARIPVGKTREESSRLLSQTSAAVAVPRPLDFTGIE
DISPIVDASVAGGVLSIRELCSVKRTLAAARFLLQQLEEIDFSERYSSLKEILHSCDFLV
ELEQKIEFCIDCSFSVILDRASEDLEIIRSERKRNMDNLELLLKQLSTQVFQGGGFDRPL
VTKRRSRLCVAVRASHRSLLPNSVILDTSSSGSTYFMEPKEAVELNNMEVKLSSSEKVEE
QTILSLLTSEIAESNMKIKHLLDKILEIDLAFARAAHAQWMGAACPALSPRNCNISQSEH
LSINVEGIQHPLLLESSLENLSTDVSPRSPDLDQGNGVVNFETKSHAHFPVPIDIKIGHG
TKVVVISGPNTGGKTASMKTLGLASMMLKAGMYLPAQNKPQLPWFDLILADIGDQQSLEQ
SLSTFSGHISRLREILEVASGESLVLIDEIGSGTDPSEGVALSESILQYLKDRVNLAVVT
THYADLTRLKEKDNRFETAATEFSLETLQPTYRILWGSMGESNALNIAKSMGFDERIIER
AVLWVNKLRPDKQQEQKGLLYRSLIEERDRLESQAMEAASLHSDIMNIYNEINNETQDLD
GREAALIAKETHEIQQEVRAVKNEIQTIVQRFESQLGNVSVDEINTLVKKAEAAIASIVE
AHQPSKDFLVREIGQSLYTPQVGEQVYVKAFGNKLATVVEEPGDDDTILVQYGKIKVRVD
KSSIRPIPPDASSSAANLKTQVQQIRSLRDLGSLSEASKNQQDSYGPVLQTSKNTVDLRG
LRVEDASHQLKIAIDSRAPNSVIFVIHGMGTGVVKESALKLLKDHPRVVKFEPESPMNYG
CTVAYIK
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacttcaactgcaaatgcaaatccaacaatttcttcagcattcatctt
cctccgcctcacagctcgctctgtaaccgtcgtacaactaggttctccgtccgtttctca
tccgagtcaactcacagagtcaaactcgccgagtcactgcaatccgaaaccttgaagctt
ctagaatggcccgccgtgtgtcaacagctctccgctttcacgtccacatccatgggatac
gccgcagcacaatctgctcggattccggtgggtaaaactcgtgaagagagcagtagactt
ctctctcagacctcggccgcggtggctgtacctcggccgttggattttaccggaattgaa
gatatttccccaattgttgatgcttccgttgcaggcggtgtactctcgattcgtgaactt
tgctctgtgaaacgaaccttggcagcggcgagatttttgctccaacagttggaggagatt
gatttttctgaaaggtactcttctctgaaggaaattcttcacagttgtgattttcttgtg
gaattggagcaaaaaatagaattctgtattgattgcagcttttcagtaatccttgataga
gctagtgaagatttggaaattataagatccgagagaaagaggaacatggataatctagaa
ttattgttgaagcaattatcaactcaagtttttcaaggtggaggatttgacaggccttta
gtgaccaagcgccgttcaagattgtgtgttgctgtgagagcttcacatagatctttgctt
cctaattccgtaatcctagatacaagcagtagtggatctacatacttcatggaacctaaa
gaggcagttgagctaaacaacatggaagttaaactttctagttctgagaaggttgaggag
caaacaattttgagtttgcttacatctgaaatagcagaatctaatatgaaaataaagcac
ttattagataaaatattggaaatcgatcttgcatttgcaagggctgctcatgctcagtgg
atgggtgctgcctgtccagctttaagtccaagaaattgcaacatatcccaatctgaacat
ttatctataaatgtagaagggatacaacatcctttgcttcttgaatcctccttggaaaac
ttgtcgactgatgtgtccccaagatcacctgatttggatcaaggaaatggtgtcgtgaat
ttcgagacaaaatctcatgcacatttccctgtgcccattgatattaaaattggtcatgga
acaaaggttgttgtcatctcgggcccaaataccggaggcaaaacggcttcaatgaagact
ctaggactggcttctatgatgttgaaggctggcatgtatttgcctgcccaaaataaacca
cagcttccatggtttgaccttattctggcagacattggggaccaacagtctctggagcaa
agtctatcaacctttagtgggcacatttcacggcttcgtgagattctagaagttgcttct
ggagaatctctagttcttattgatgaaattggaagtgggaccgatccttcagaaggtgta
gcactttcagaaagcatactgcaatatctcaaggacagggttaatttagctgttgtaact
acccactatgcggatttaactcgcttaaaagaaaaggacaatcggtttgaaacagcagca
acagagttttccttggagactctacagcctacctatcggattctatggggaagcatgggt
gaatcaaatgccttgaatattgcaaaatcaatgggctttgatgaaagaataattgagcga
gcagtattatgggtgaacaaattgagaccagacaagcagcaggagcagaagggtttactt
tatcggtcactaattgaagaaagagatagactagaatctcaagcaatggaagctgcttct
cttcattcagatattatgaatatttataatgagattaacaatgaaacacaagaccttgat
ggacgtgaagctgccctcatagcaaaggaaacacatgaaatacaacaggaagtgagagct
gtgaaaaatgagatccaaactatagtacagcggtttgagagccaactcggaaatgtaagt
gttgacgagattaatacacttgtaaaaaaagcggaagctgctattgcatcgatagttgaa
gctcatcagcctagtaaagattttcttgtcagagaaataggccagagcctttacacacca
caggttggtgaacaagtatatgtgaaggcgtttggaaataagttggccactgtggttgag
gaacctggggatgatgacactatccttgttcaatatggaaaaatcaaagtccgcgtggac
aagagcagtataagacccattccccctgatgcttcctccagtgcagctaacttgaaaacc
caggttcagcagatcaggagtctcagggaccttggaagtctctctgaagcaagcaaaaat
cagcaggattcttatggccctgtgctgcagacatctaaaaacaccgtagatttacgtggc
ctgagagtggaggatgcttctcatcagctcaaaatagccattgattcaagagcgcctaat
tctgttatttttgttattcatgggatgggcactggagtcgtaaaagaatctgcacttaaa
ttactaaaagatcatcctcgtgttgttaagtttgaaccggaaagtcctatgaattatggc
tgtacagttgcttatatcaaatga
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