KEGG   Solanum lycopersicum (tomato): 101246043
Entry
101246043         CDS       T02665                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101246043
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sly03041]
    101246043
Spliceosome [BR:sly03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    101246043
 Complex B
    101246043
 Complex C
   U2 SnRNP specific factors
    101246043
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 101246043
NCBI-ProteinID: XP_019068780
LinkDB
Position
4:1015487..1019864
AA seq 803 aa
MFGTTTILPLPAPPLDGNLGPTPPAQVVEEPEDDRMEENEEDNNKGNKVPTSVATHTRTI
GIIYPPPDIRSIVDKTSQFVAKNGPEFEKRIVLNNAGNAKFNFLNASDPYHAYYQHRLAD
ARAQNQASGEQPTQPDDNEAAPAPPTADGAEATAKPDPSAQFRPVRKVLEPPEAEQYTVR
LPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADA
YSKVLMPPKGLTDKLQKSAADMTTVLERCLHRLEWERSQEQARQKAEDEIEQERVQMAMI
DWHDFVVVETIDFADDEDQDLPPPMTLEEVIRRSKMPTLEEEEYVEPGKEVEMEMDEEEV
QLVEEGMRAATLEENGDIKSAETMTISEEQDPPMRIVKNWKRPEERILAERDPTKYVVSP
ITGELIPINEMSEHMRISLIDPKYKEQKDRMFAKIKETTLAQDDEISRNIVGLARTRPDI
FGTTEEEVSNAVKAEIEKKKEEPKQVIWDGHTGSIGRTANQAMSQNSDDQNDAANDARNL
PGPQAPPPPRPGFPSIRPLPPPPGLALNIPRPPNTVQYSTPGVAAPPPPRPPMVNMIPQV
RPPPPPMPQMPGQQNLMVNRPPMPPSMGMNSLNLPIPPPPGSQFTPLGAPRPFVPHPMSQ
PGMSMVPPPPMPQGMPPPPPPEEAPPLPEEPEPKRQKLEESILIPEDQFLAQHSGPARIN
ISVPNTDEGNLKGQILEITVQSLSETIASLKEKISGEIQLPANKQKLSGKAGFLKDNLSL
AYYNVASGETLGLSLRERGGRKR
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgtttggtaccacaacgatattgccccttccggcaccgccgttggatgggaatctggga
ccaacacctcctgctcaggtggtagaggaaccagaggatgataggatggaagagaatgaa
gaggacaacaataaaggcaacaaggttccaacatctgttgctacacatactagaactatt
ggtatcatttaccctcctccagatattaggagtattgttgataagacttcgcagtttgtt
gcgaagaatggtccggaatttgagaagagaattgttctaaataatgctggcaatgcgaaa
tttaacttcttgaatgcctctgatccttaccatgcctattatcagcaccgtttggctgat
gctcgcgcacagaatcaggcttctggagagcagcctactcagccagatgacaatgaagca
gcccctgctcctcctactgctgatggtgctgaggcaactgctaaacctgatccgtcagct
cagtttagacctgtaagaaaggttctcgagccacctgaggcagagcaatatactgtaaga
ctccctgaagggatcacaggtgaagaactggatattattaagctaacagcacaatttgtg
gccagaaatgggaagtctttcttaacagggttaacaagcagggagattaataatccccaa
tttcattttctaaagcctactcacagcatgttcatgtttttcacttcacttgctgatgcg
tattcaaaagttctgatgcctccgaaaggcttgacggacaagctgcagaagagtgctgct
gacatgacaacagtcctagagcgatgtctgcatcggttggaatgggaaaggtcacaggag
caggctcggcaaaaagctgaagatgagatagaacaagagagggtgcagatggctatgatt
gattggcatgattttgttgttgttgagactatagattttgccgatgacgaggatcaggat
ttacctccacctatgaccctagaggaggttataaggaggagcaagatgcctacattggag
gaagaagagtatgttgagcctggaaaagaggtggaaatggagatggatgaagaagaggtg
cagctagttgaagaaggtatgcgagctgcgactcttgaagagaatggtgatatcaagagt
gctgaaaccatgacaatttcagaggaacaggacccaccaatgcggattgtgaagaactgg
aagaggcctgaagagaggatcctggcagaaagggacccaactaagtatgttgtctctcct
ataaccggtgagctcatacctattaatgagatgtctgaacatatgaggatctctctcatt
gatccaaagtacaaggaacagaaggacaggatgtttgcgaagattaaggagacgactctt
gcgcaggatgatgagatttctaggaacattgttggacttgcaagaacccgtccggatata
tttggtaccacagaagaagaagtttcaaatgcggtcaaggctgagattgagaaaaagaag
gaagagccgaagcaagtcatatgggatggtcacacaggtagcattggtcgcactgcgaac
caggcaatgtctcagaacagtgatgatcagaatgatgctgcaaatgatgcaagaaacctt
cctggaccgcaggctcctccacctcccagacctggttttccatctattaggccactacct
ccaccacctgggcttgcactgaatattcctaggcctcctaatacagtccagtattctact
cctggggttgctgctccgcctccacctcgacctcctatggttaacatgattcctcaggtt
cggcccccacctcctcccatgccacagatgccaggtcagcaaaatctcatggtgaatcgc
cctccaatgcctccatcgatgggtatgaattctcttaaccttcccattccaccacctcct
ggatcacaatttactcctttgggagcacctcgaccctttgttccccacccgatgtcccag
cccggaatgtctatggtcccaccgcctcctatgccccaaggaatgccgccaccccctcca
ccagaggaagcgcctcctctccctgaagagccagagccaaagaggcaaaagcttgaagag
tctattctcattcctgaagaccagtttttggctcagcactcgggacctgcaaggatcaat
atatctgtgccgaataccgatgaagggaatctcaaaggacaaattctggaaattacagtg
caatctctgtccgaaaccattgccagtctaaaagagaagatttctggggagattcagctg
cctgcaaacaaacagaaactgagtggaaaggctggttttctcaaggacaacttgtctctt
gcgtactataatgttgcatctggagaaacacttggtctctcactaagagaacgtggtggg
agaaagagatga

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