KEGG   Solanum lycopersicum (tomato): 101246064
Entry
101246064         CDS       T02665                                 
Name
(RefSeq) DNA-repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101246064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sly03400]
    101246064
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     101246064
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5
Other DBs
NCBI-GeneID: 101246064
NCBI-ProteinID: XP_004241724
LinkDB
Position
6:42074526..42079713
AA seq 384 aa
MSGSNDGDKNGRKRNLPSWMSSKPGSSGSGQSKSNDERETTETTEQAKGRRKTNHGKTLP
DEAENEAHFSNFSKLMEGVVFVLSGFVNPERGTLRSQALEMGAKYQPDWNSESTLLICAF
SNTPKFRQVEADNGTIVSKEWITECYKQRKLVEIETYLMHAGKPWKRQSVSRESSQDQRP
STSRKSQTRGEKSSPFKTTAAPSSEEIHSDKVKDGFSPYKVKKWAINDLNRTISWLENQD
ERPEPHEMKKIAAEGILTCLQDAIDSLNQGQDMRQITEQWECIPRAVEELAKFDGSCVGS
ATMHKDLCKHAVTCKQIYELEYKNREDDELLKMKEQRTRVGGKAGGAAKDAAAYDSDDTV
EMTEEEIDQAYNAVASTIRNSKRV
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgtctgggtcaaacgacggtgacaagaatgggaggaaacgtaatcttccttcatggatg
agttcgaaacccggttcaagtggttcgggtcagagtaaatcaaatgatgaacgtgagacg
acggagacaactgagcaagcgaaaggtagacgcaaaaccaaccatggcaaaacactcccc
gacgaagctgagaacgaagcacatttttcaaatttctcaaaacttatggaaggggttgta
tttgtcctatcaggttttgtcaatcccgagcgtggtacattaaggtcccaggctctagaa
atgggagccaagtatcaacctgattggaactcggaatccacacttttgatctgtgcattt
tccaatacaccaaagtttcgtcaagttgaagcagataatggaacaattgtatcgaaggag
tggataacagagtgttacaaacaacgaaaacttgttgaaatcgaaacttaccttatgcat
gctggcaagccatggaaacgtcaaagtgtttctcgtgaatccagccaagatcaaagacca
tcaacatcaagaaaatctcaaacaagaggagagaaaagttcaccttttaagacaactgct
gctccttcatctgaggagatacattctgataaagtaaaagatggtttctctccatataaa
gtgaaaaaatgggctataaatgatcttaatcggacgatttcatggctggagaatcaagat
gaaaggccagagccccatgagatgaagaaaatagcggccgagggaattcttacctgttta
caggatgccatagattctcttaatcaagggcaggatatgcgtcaaataactgaacagtgg
gaatgcatccctcgtgctgttgaggagctggcaaagtttgatggtagttgtgttggttca
gctacaatgcataaggatctttgcaaacatgctgtgacctgtaaacaaatttatgagctg
gagtacaaaaatagggaagacgatgaacttttgaagatgaaagagcagcggactcgcgta
ggtggaaaggctggtggagctgccaaagatgctgctgcatatgacagtgatgataccgtt
gagatgacagaagaggaaatcgaccaagcttataatgccgtagcatctaccattagaaac
agtaagcgagtgtaa

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