Solanum lycopersicum (tomato): 101246148
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Entry
101246148 CDS
T02665
Symbol
AGO4B
Name
(RefSeq) Argonaute 4B
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101246148 (AGO4B)
03036 Chromosome and associated proteins [BR:
sly03036
]
101246148 (AGO4B)
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101246148 (AGO4B)
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101246148 (AGO4B)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
101246148 (AGO4B)
microRNA pathway
RISC loading complex
101246148 (AGO4B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
101246148
NCBI-ProteinID:
NP_001289847
UniProt:
K4LP77
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All DBs
Position
6:47820698..47829323
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AA seq
913 aa
AA seq
DB search
MAEEENGGSTEALPPPPPVPLNFSPAQAEPEPVKKKVLRVPMARRGLGSKGQKIPILTNH
FKVNVSNVDGHFFHYSVALFYEDGRPVEGKGIGRKVLDRVHETYDTELAGKDFAYDGEKS
LFTIGSLPRNKLEFTVVLDDITSNRNNGTNGNSSPGRHGSPPNETDRKRLRRPYQSKTYK
VEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKN
FADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFSLDW
AKAKRVLKNLRVKTAPANQEFKITGLSEKPCREQMFTLKQKSKDEDGEVQTSEVTVYDYF
VNHRNIDLRYSADLPCLNVGKPKRPTYFPIELCTLVSLQRYTKALSTFQRASLVEKSRQK
PHERMQILSNALKINNYDAEPLLRSSGVSISSNFTQVDGRVLPAPKLKAGNGDDLFTRNG
RWNFNNKRFFEPAKVERWAVVNFSARCDVRGLVRDLTRLGETKGISVEAPFEVFEESPQL
RRAPPVVRVDKMFEEIQSKLPGAPKFLLCLLPERKNCDIYGPWKRKNLADHGIVTQCLAP
GRVNDQYLTNLLLKINAKLGGLNSMLAAEISPSIPMVSKVPTMILGMDVSHGSPGQSDVP
SIAAVVSSRQWPSISRYRASVRTQSPKVEMIDNIFKKVSDTDDDGIMRELLLDFYVSSGK
RKPEHIIVFRDGVSESQFNQVLNIELDQLIEACNFLDEKWSPKFVIIVAQKNHHTKFFQS
GSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDELQELVH
NLSYVYQRSTTAISIVAPISYAHLAATQVGQWMKFEDASETSSSHGGLTNAGPVTVPQLP
RLQENVASSMFFC
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaagagaatggtggatccacagaggctctgcctcctcctccccctgttcca
cttaatttctctcctgcacaagctgaaccagagccagtgaagaagaaggttttacgtgtt
cccatggcaaggcgtggccttggaagcaagggacaaaagattccgatccttaccaatcac
tttaaagtgaacgtgtctaatgttgatggacacttctttcattacagtgttgccttattt
tatgaggatggtcgacctgtcgagggaaaaggcattggcagaaaagttctggatagagtg
catgaaacatatgatacagaattggctgggaaggattttgcatatgatggggagaagagt
ttgttcaccatcggttcactacctagaaataaactagagttcacagttgtactagatgac
ataacatctaatcggaacaacggtaccaatggcaactctagccctggcagacatggaagc
cctcctaatgaaactgataggaaaagattaaggcggccataccaatctaaaacttataag
gtggagattagctttgctgccaagattccaatgcaggcgattgcaaatgctttgcgaggt
caagagtctgagaactctcaagaagccttgcgagttttggatataattttaaggcagcat
gctgcaaaacagggttgtttacttgttcgtcaatcctttttccataatgatcctaagaac
tttgctgatgttggcggtggtgttctgggctgccgagggttccattcaagttttcgtacc
acccagtcgggattgtcattgaacattgacgtgtctaccactatgataatccaacctggg
cctgtggtcgactttctgatagcgaaccaaaatgcaaaagatcccttttcacttgattgg
gcaaaggcaaaacgcgtgttgaagaacctgcgagtgaagactgctcccgctaaccaagaa
ttcaaaataactggattgagcgaaaaaccttgtcgtgagcagatgtttactctaaagcag
aagagcaaagatgaggatggtgaagtgcaaacttcagaagtgactgtttatgattacttt
gttaatcatcgtaacatagacttgcgatattctgccgatttgccgtgcctcaatgttgga
aagcctaaacgtcctacctatttccccattgagctctgcactttggtctcattgcaaagg
tacacaaaagccttgtccacctttcagagggcttccttggtggagaagtccaggcaaaag
cctcacgagagaatgcaaattttgagcaatgctctcaaaatcaacaattatgatgctgag
cctctgcttcgttcttctggtgtctcaatcagtagcaacttcacccaggttgacgggcgc
gtactgcctgctcctaagttgaaggctggaaatggagatgaccttttcacccggaatgga
aggtggaactttaataataagagattctttgagccagcaaaggtagagcgttgggctgtt
gtgaacttttctgcacgctgtgatgtccgtggtctagtcagagatttgacaagacttgga
gagacgaagggaattagtgtggaagctccatttgaagtgtttgaagagtctccacagctt
agaagggctccacctgttgtcagagttgacaaaatgtttgaagagatccagtcaaaactt
cctggtgcccccaagtttcttctctgtcttcttcctgagaggaaaaattgtgacatatat
ggtccatggaagcgaaaaaatctggctgatcatggtatagtaactcaatgcttggctcct
ggaagagttaatgatcagtatctcacaaaccttctccttaagatcaatgctaagcttggt
ggtttaaattctatgttagctgcggagatttctccttccatccccatggtatctaaggtc
cccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgttcca
tcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttca
gtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagac
actgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaa
aggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaa
gttctaaacatagaactggaccagctcattgaggcctgcaattttctagatgagaagtgg
tcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtct
ggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaagg
aacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacat
taccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcat
aatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagt
tatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagag
acatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccc
cgtcttcaggagaacgttgctagctccatgttcttctgttga
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