Solanum lycopersicum (tomato): 101246211
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Entry
101246211 CDS
T02665
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101246211
Spliceosome [BR:
sly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101246211
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GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
101246211
NCBI-ProteinID:
XP_019066603
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Position
11:58053886..58061433
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AA seq
816 aa
AA seq
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MSTPLLCNTSLIQSSMPTVLRPPSSPLRRHHGGRRHHRHHLLPSSPFFLPLKPLSLSPSI
SLYTPFSSSSTSPQQLLLDSQENQVDFDNWDPVSASGVAESFNFDDSFDSVELKKFETPS
IEVRELEDIPDQWRRARLAWLCKELPAHRTPTMVRILNAQRKWFRQEDGSFVAVHCMRIR
ENEAAFRVYKWMMPQHWFRFDFALATKLADYLGKERKHLKCREIFDDIINQGRVPCESTF
HILIIAYLSSSGPSVLDEACNIYNRMVHLGGYKPRLNLHNSLFKALLGKTSSESKQFLKQ
AEFIYQNLTSSGLEIHRDIFGGLIWLHSYQDVVDMERIAALRAEMRSRGIEESKEVLVSV
LRACSKDGNVEEAERTWSKLLSIDGCPPSQAFVYRMEVYAKIGEPTKSLKVFRRMQEQLG
STSVAAYHKIIKVLSKYQKLDLADSIMSEFINSGMKQLVPSFIDLMRMYSIAGLHEKLES
TFLRYREVCHPNLTVFNIYLDLLVNTGNLSLAEEIFHEMRGNVAIGVDSRACNSILRGYM
TSAEYVKAVKIYNLMRQKKYDVEIESSLMERLDYVLSLREKVIEKPIRLKLTAEQREVLT
GSLLGGVQIRSDEERRLHAIHYEFNEESRIHSIFKRHIHDEFHEWLGSHDMMVDSTADIP
SSFTTISHSDFTFYADQFWPNGRPCIPKLIHRWLSPRVLAYWYMYGGYRTSSGDILLRVK
GSSEGVVSILKALKAKSLHCRVKNRGKVFWIGFLGDNATFFWKVVEPFIIDELKGLLKAG
GDSNGSLETQCINFDSGSESNEKNSGYIEPDTSLSD
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccactgttatgtaatacttcccttatccaatcctccatgcccaccgtcctc
cgccctccctcctccccactccgccgccaccacggcggccgccggcatcatcgccaccac
ctcttaccttcatcaccctttttccttcccctaaaacccctttcattatctccctcaata
tccctttacacccccttttcttcatcttccacttcaccccaacaacttctactcgattcc
caagaaaatcaagttgatttcgacaattgggaccccgtttctgcttctggggttgctgaa
agtttcaattttgatgattcttttgactctgtggagttgaagaagtttgaaaccccatct
attgaggtgagggaattagaggatatacctgatcaatggcgtagggcaagattagcttgg
ctttgtaaagagcttcctgctcacaggacgcctactatggttaggattttgaatgcacaa
aggaagtggtttaggcaagaagatgggagttttgttgctgttcattgtatgcgaattcgc
gaaaatgaagctgcttttagggtttacaaatggatgatgccgcaacattggtttcgattt
gattttgctctagctacaaaactagcagattacttgggaaaggaacgaaagcacttgaag
tgccgggagatttttgatgacataattaatcagggacgagtgccttgtgaatctacattc
catattctcattattgcctatcttagttcatctggaccatcagtgctagatgaagcatgt
aacatctacaatcgcatggtgcacttgggaggttataagcctcggcttaacttacacaat
tctctgtttaaagctcttttggggaagacatcgagcgagagtaaacaatttctgaaacag
gctgaatttatatatcagaacttgacttcctctggattggaaatacacagagatattttc
gggggtcttatatggcttcacagttatcaagatgtggtcgatatggaaagaatcgctgca
ctaagagcagaaatgcggtctagaggaattgaagagagcaaagaggtacttgtgtcagtt
ttaagagcttgctcgaaggatggaaatgtggaggaagccgaaagaacttggtcaaaactt
ctctccatcgatggctgtcctccttctcaagcttttgtctatcgtatggaagtatatgca
aagattggagaacctacaaaatctttgaaagtatttaggaggatgcaggaacaactgggt
tccacctccgttgcagcataccataaaataataaaggtgctgtctaaatatcaaaaacta
gaccttgcagattctatcatgtctgagttcataaacagtggtatgaaacagctggtccca
tcattcatcgatttgatgaggatgtactccattgcaggtttacatgagaaactggaatct
acctttctccggtaccgtgaagtctgccatccgaatctgacagtttttaatatttatttg
gatttattggtgaatactggcaatctgagcctcgctgaagaaatcttccatgaaatgcgt
ggtaatgtggcaattggtgttgattctcgtgcttgcaacagtatcttgagaggctatatg
acctctgcagagtatgtgaaggcagtaaagatatacaatttgatgcgccaaaagaaatac
gacgttgagattgaatcttcattgatggaaagacttgattatgttcttagcttgcgggag
aaagtaattgaaaaacctattagactgaagctcacagcagagcaacgagaggttttgaca
gggtcgcttcttgggggtgtgcaaattagatcagatgaagagagaagattgcatgcaatc
cattatgaatttaatgaagagtcgaggatccattccatttttaagagacacatacatgat
gaatttcacgagtggttaggctctcatgatatgatggtggatagcactgcggacattcct
agttcttttactaccatttcacattctgattttactttctatgctgatcagttctggccc
aacggacgtccttgtataccaaaacttatacatagatggttgtcacctcgcgttcttgct
tactggtatatgtacggtggttaccggacatcatctggtgatattctgttgagagtaaag
ggaagttcagagggtgttgtgagtattcttaaagcactaaaagccaaatcgttacactgc
cgagtaaaaaatagagggaaggtcttttggataggatttctgggggacaatgctacattt
ttctggaaggtggtagagcccttcattattgatgagttaaagggactccttaaagcaggt
ggcgactcaaatggatccctggaaacccaatgtatcaattttgacagcggatcagagtcc
aacgagaagaattcaggttatatcgaacctgacacgtccttgtctgattga
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