Solanum lycopersicum (tomato): 101246236
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Entry
101246236 CDS
T02665
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
101246236
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
101246236
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
101246236
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
DicA_C
Motif
Other DBs
NCBI-GeneID:
101246236
NCBI-ProteinID:
XP_004236359
LinkDB
All DBs
Position
3:complement(58403826..58408351)
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AA seq
565 aa
AA seq
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MAAAAVAVAETRKLPRPGRGGVVSLGLTDEEARVRAITEIVNNMVELSRKGKDVDLNALK
SAACRKYGLSRAPKLVEMIAALPDSERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHI
ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV
DKVEFILMGGTFMSLPAEYRDYFTRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTIET
RPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV
AHMMPDLPNVGVERDLESFKEFFESPSFRTDGLKIYPTLVIRGTGLYELWKTGRYRNYPP
EQLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR
TREAGIQDIHNKIRPEEVELVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTC
PELTGRCSIVRELHVYGTAVPVHGRDTDKLQHQGYGTLLMEEAERIARREHRSTKIAVIS
GVGTRHYYRKLGYELEGPYMVKNLV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggtagcggtagcggagacccgaaagctcccgcggccgggaaggggc
ggagttgtttccctcggcctgacagatgaagaagctagagttcgtgctataacggagatc
gtcaacaacatggtggaactctcacggaaaggcaaggatgttgacctaaatgcgctaaag
tcagcagcgtgccgaaaatacgggctctctcgggctcctaagttggtagagatgatcgct
gctttgcctgactctgaacgtgaaacactgcttcccaaactccgagccaagcctgtccgt
acagcctctggaatagctgtcgtagctgtaatgtccaagcctcatcgttgtcctcatata
gctaccaccggaaacatttgtgtctattgccctggcggccccgattctgattttgagtac
agtacacagtcatacacgggatatgaacctactagtatgcgagctattcgagctagatac
aatccttatgtacaagctcgaagccggattgatcaacttaagagattgggtcacagtgtt
gacaaggttgaatttatcttgatgggaggtacattcatgtcattgcctgctgaataccgt
gattacttcacacggaatctccatgatgctttatccggacatacttctgccaatgttgaa
gaggctgtcgcatactctgaacatggggcgacaaagtgcattgggatgacaattgaaacg
aggccagactactgccttggacctcatctgagacaaatgctttcttacggttgtacgcgg
ctagaaattggagtacagagtacgtatgaggatgttgctcgtgacaccaatagaggccac
actgttgcagctgtggctgattgcttttgtttggcaaaagatgctggcttcaaggtggtt
gctcatatgatgccggaccttccaaatgttggcgttgaaagagacttggagagtttcaag
gaattctttgaaagtccttcatttaggactgatggacttaaaatttatcctacacttgtt
attcgtggcacgggactctatgaactgtggaaaactggaaggtatagaaattatccgcca
gagcagcttgtagacattgtagcaaggattctttctatggtgccaccttggacccgagtt
taccgggtccaacgtgatatccctatgcctctagtgacttctggagttgagaaagggaat
ctccgagaactggctttagctcgaatggatgatcttggcttgaaatgccgagatgtccga
acacgcgaagctgggatccaggacattcacaacaagataaggcctgaagaggttgagctt
gttcgccgcgattatactgcaaatgaaggatgggagactttcctttcatatgaagataca
cgccaggatattcttgttggattgctacggctgcggaagtgtggacggaatgtgacttgc
ccagaacttacgggaaggtgttcaattgttcgtgagcttcatgtgtatgggactgcagtt
cctgttcatggtcgagacacagataagctgcagcaccagggttatggtactctgctgatg
gaggaggctgagcggattgctcggagggagcataggtcgaccaaaatcgctgttatatcg
ggtgtagggacccggcattactacagaaagctaggctatgagcttgaaggtccttacatg
gtaaaaaaccttgtgtag
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