Solanum lycopersicum (tomato): 101246329
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Entry
101246329 CDS
T02665
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03015
mRNA surveillance pathway
sly04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101246329
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101246329
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101246329
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101246329
03036 Chromosome and associated proteins [BR:
sly03036
]
101246329
Protein phosphatases and associated proteins [BR:
sly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101246329
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101246329
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101246329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR3_1st
Beta-prop_NOL10_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
117-like_vir
Motif
Other DBs
NCBI-GeneID:
101246329
NCBI-ProteinID:
XP_004235614
UniProt:
A0A3Q7FVL5
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All DBs
Position
3:complement(66353348..66361726)
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AA seq
517 aa
AA seq
DB search
MNGGDGGDVAAAPAGPPPPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDR
GGRVVLFERTDTKENIGSRRELERMDYSVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQSSNGALFLLSTNDKTIKYWKVQEKKVKKIYDMNIDPSRAVGNGSVASSSVSSS
PKQCSANGGYADRSLNCLSNDLSFPPGGFSSLRLPVVTSNETSLVARCRRVYAHAHDYHI
NSISNNSDGETFISADDLRVNLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPTHCN
TLAYSSSKGSIRLVDLRQSALCDSHSQLFEEQEAPGSRSFFTEIIASISDIKFSKDGRYI
LSRDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATG
SYSNLFRVFGCAAGTTEATTLEASKNPMRRQVQTPSRPSRSLSSSITRVVRRGSESPGVD
ANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggtgatggtggagatgtcgcggcagctccggcgggtccaccaccgccgctt
gagtggaaattttctcaggtatttggtgaacgtacggccggagaagaagttcaggaagtt
gatatcatctccgcaattgagttcgataaaactggtgaccatcttgctactggagatcgt
ggtggtagggttgtattatttgaaagaactgatacaaaagagaatattggaagtcggaga
gagctagagagaatggactattcagtgagtcggcatccagagttccgttacaagacagaa
tttcaaagccatgagcctgagtttgattatctgaagagtttggaaattgaggagaaaatc
aacaagatccgttggtgccaatcgtctaatggtgccctctttcttctatccaccaatgac
aaaaccattaagtattggaaggtccaagagaagaaagttaagaagatatatgatatgaat
attgatccttctagagctgttggaaatggcagtgtggccagctctagtgtttcttccagt
ccaaagcaatgtagtgctaatgggggttatgcagatagatctttgaattgcttgagcaat
gatttgtcgtttccacctgggggcttttcttcattacgtttacctgtggtaacaagtaat
gagaccagccttgttgctaggtgcagaagagtgtatgctcatgcacatgactatcacatc
aactctatttcaaataacagtgacggcgaaacatttatatctgctgatgatctccgggtc
aacctttggaacttggaaataagcaatcagagtttcaatattgttgatgtcaagccaaca
aatatggaagatttgactgaggtgataacttcagcagaatttcatcctactcattgtaat
acgttagcttatagtagttcaaaagggtcgattcgtctcgtagatctgcggcagtcagct
ttgtgcgactcacattctcagttgtttgaggagcaagaagcacctggttcaagatctttt
ttcacagagataattgcttcaatttctgatattaaattttctaaggatggaagatacata
ctcagccgtgactatatgaccctaaagctatgggacataaatatggattctggtccagtg
tcaaccttccaggttcatgaatatttaagaccaaagctatgtgatttatatgagaatgac
tccatctttgacaagttcgagtgttgccttagtggtgatgggctgcgagtagctactggt
tcttatagtaatcttttccgtgtctttggttgtgctgcgggcactactgaagcaactaca
ctggaagctagcaaaaaccccatgagaagacaagtacagactccttcaagaccttccagg
tccctgagcagtagcataacacgtgttgtcaggagaggttcagaaagtccaggtgttgat
gcaaatggaaattcatttgatttcacaacgaagttgctccatctagcgtggcatccaacc
gaaaattcaattgcctgtgccgctgcaaacagcttgtatatgtattatgcataa
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