KEGG   Solanum lycopersicum (tomato): 101246377
Entry
101246377         CDS       T02665                                 
Name
(RefSeq) uncharacterized protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101246377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sly03041]
    101246377
   03032 DNA replication proteins [BR:sly03032]
    101246377
Spliceosome [BR:sly03041]
 Complex A
  U1 snRNP components
   Sm proteins
    101246377
  U2 snRNP components
    101246377
 Complex B
  U1 snRNP components
    101246377
  U4/U6.U5 tri-snRNP components
    101246377
 Complex C
  U2 snRNP components
    101246377
DNA replication proteins [BR:sly03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     101246377
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 101246377
NCBI-ProteinID: XP_004247417
UniProt: A0A3Q7I6X8
LinkDB
Position
9:complement(64247090..64250939)
AA seq 109 aa
MSRPMEEDAPQGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM
VLENVREMWTEVPKTGKGKKKAVAVNKDRFISKMFLRGDSVIIVLRNPK
NT seq 330 nt   +upstreamnt  +downstreamnt
atgagtcgaccaatggaagaggatgcccctcaagggaaaaatgaggaagaggagttcaat
actgggccactttctgtcctcatgatgagtgttaagaataacacacaggtgctcatcaac
tgtaggaacaacaggaaacttcttggtcgtgtgagagcatttgatcgtcactgcaatatg
gtgcttgaaaatgttagagaaatgtggactgaggtgcccaagactggaaaaggaaaaaag
aaagctgttgctgttaacaaagataggtttatcagcaagatgttccttcggggagattct
gtgatcattgtcctccgaaatcccaagtag

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