Solanum lycopersicum (tomato): 101246377
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Entry
101246377 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101246377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101246377
03032 DNA replication proteins [BR:
sly03032
]
101246377
Spliceosome [BR:
sly03041
]
Complex A
U1 snRNP components
Sm proteins
101246377
U2 snRNP components
101246377
Complex B
U1 snRNP components
101246377
U4/U6.U5 tri-snRNP components
101246377
Complex C
U2 snRNP components
101246377
DNA replication proteins [BR:
sly03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
101246377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
101246377
NCBI-ProteinID:
XP_004247417
UniProt:
A0A3Q7I6X8
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All DBs
Position
9:complement(64247090..64250939)
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AA seq
109 aa
AA seq
DB search
MSRPMEEDAPQGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM
VLENVREMWTEVPKTGKGKKKAVAVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaccaatggaagaggatgcccctcaagggaaaaatgaggaagaggagttcaat
actgggccactttctgtcctcatgatgagtgttaagaataacacacaggtgctcatcaac
tgtaggaacaacaggaaacttcttggtcgtgtgagagcatttgatcgtcactgcaatatg
gtgcttgaaaatgttagagaaatgtggactgaggtgcccaagactggaaaaggaaaaaag
aaagctgttgctgttaacaaagataggtttatcagcaagatgttccttcggggagattct
gtgatcattgtcctccgaaatcccaagtag
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