Solanum lycopersicum (tomato): 101246438
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Entry
101246438 CDS
T02665
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101246438
03036 Chromosome and associated proteins [BR:
sly03036
]
101246438
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101246438
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101246438
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
101246438
microRNA pathway
RISC loading complex
101246438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
101246438
NCBI-ProteinID:
XP_025887457
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All DBs
Position
6:47813447..47820356
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AA seq
904 aa
AA seq
DB search
MAEQEYGGSTEALPPPPPVPLDFSPEKAEPAPVEKKLLRVPMARRGLGKKGRNIQILTNH
FQVNVSNVDGHFFHYSVALFYEDGQPVEVKGIGRKVLDRVHETYHAELAGKGFAYDGEKS
LFTIGSLPRSRFEFTVVLNDITSNRNVGTSSPPNEADRKRLRRPYQSKTYKVKISLAGKI
PMQAIANAFRGQEYENSQEALRVLDIILRQHAAKKDCLLVRQSFFHNDSNNFVDVGGGVH
GLRGFHSSFRTTQSGLSLNIDMSTTMIIKPGPVLDFLIANQNSRDSVSLDWAKAKRVLKN
LKVQTATSNQEFKITGLSEKSCREQTFILKRRSKDEDCEVQTSEVTVYDYFVNHCNIDLR
YSADLPCLNVGKPKRPTYFPIELCTLVSLQRYTKALSTFQRASLVEKSRQKPQERMQILS
HALKMNNYDAEPLLHSCGVTINSDFTQIEGRVLSAPELKAGNGVDIFAQSGRWNFNNKRF
FESAKVEKWAVVNFSTNCDIGKLVECLTGLGETKGISVEAPLKVFEESRHHRRAPPVGRV
DKMFEEIQSKLPDAPKFLLCLLPERKNCDIYGPWKRKNLADHGIVTQCLAPGRVNDQYLT
NLLLKINAKLGGLNSMLAVEVSRSIPMISKVPTMILGMDVSHGSPGQSDVPSIAAVVSSR
QWPSISHYRASVRTQSPKVEIIDNIFKEVSDTRDDGIMRELLLDFHASSQQRKPQQILVF
RDGVSESQFNQVLNIELDQIIEACKFLDEKWSPKFVIIVAQKNHHTKFFPYGSANNVPPG
TIIDNKVCHPRNNDFYLCAHGGMIGTTRPTHYHVLLDEVGFKPDELQELVHNLCYVYQRS
TTATSIVAPIGYAHLAAAQVGQWMKSEGTSETSSSQDGLRNAGPVTVPQLPRLQKNVASS
MFFC
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaagagtatggtggatccacagaggctctgccccctcctccccctgttcca
cttgatttctctccagaaaaagctgaaccagcgccggtggagaaaaagttattacgtgtt
cccatggctaggcgtggccttggaaagaagggacgcaatattcagatccttaccaatcat
tttcaagtgaacgtatctaatgttgacggacacttctttcattacagtgttgctctattt
tacgaggatggtcaacctgtcgaggttaaaggaattggcagaaaagttctggatagagtg
catgaaacatatcatgcagaattggctgggaagggttttgcatatgatggggagaagagt
ttgttcaccattggttcattacctagaagtagattcgagttcacggttgtactaaatgac
ataacatctaaccggaacgttggaacctccagccctcctaatgaagctgataggaaaaga
ttaaggcggccgtatcaatctaaaacttataaggtgaagattagcttagctggcaagatt
ccgatgcaggcaattgcaaatgcttttcgaggtcaagagtatgagaactctcaagaagcc
ttacgagttctggatataattttaaggcagcatgctgcaaaaaaggattgcttactcgtt
cgtcaatcctttttccataatgactcaaataacttcgttgatgttggaggtggtgttcat
ggcttgagagggttccattcaagttttcgaaccactcagtctggattgtctttgaacatt
gatatgtctaccacaatgataataaagcctgggccagtgctcgacttcttgatagcaaat
caaaattcaagagattccgtttcacttgattgggcgaaggcaaaacgcgtgttgaagaat
ttgaaagtgcagactgctacctctaaccaagaattcaaaataactggattgagtgaaaaa
tcttgccgtgagcagacgtttattctaaagcgaaggagcaaagatgaggattgtgaagtg
caaacttcagaagtgacagtttacgattactttgttaatcattgtaacatagacttgcga
tattctgctgatttgccgtgcctcaatgttggaaagcctaaacgtcctacctatttcccc
attgagctctgcactttggtctcattacaaaggtacacaaaagccttgtccacctttcag
agggcttccttggtggagaagtccaggcaaaagcctcaggagagaatgcaaattttgagc
catgctctcaaaatgaacaattatgatgctgagcctctgcttcattcttgtggtgtcacg
atcaatagcgacttcactcagattgaagggcgtgtgctgtctgcccctgagttgaaggca
ggaaatggagttgatattttcgcgcaaagtggcaggtggaactttaataataagagattc
tttgaatcagcaaaggtagagaaatgggctgttgtgaacttctctacaaactgtgatatc
ggcaaactagtcgaatgtttgacaggacttggagagacgaaaggaattagtgtggaagct
ccattgaaagtgtttgaagagtctcgacatcatagaagggctcctcctgttggcagagtt
gacaaaatgtttgaagagatccagtcaaaacttcctgacgccccaaagtttcttctctgt
cttcttcctgagaggaaaaattgtgacatatatggaccatggaagcgaaaaaatctggct
gatcatggtatagtaactcaatgcttggctcctggaagagttaatgatcagtatctgaca
aaccttctccttaagatcaatgctaagctcggtggtttaaattctatgttagctgttgag
gtttctcgttccatccccatgatatctaaggtccccaccatgattcttggaatggacgta
tcacatggctctcccggccagtctgatgtcccatcaattgctgcagttgtgagttcaagg
cagtggccttcaatatctcattacagagcttctgtgcgcactcaatctcctaaagtggag
ataattgataacatatttaaagaagtttcagacactagagacgatgggattatgagggaa
cttttgctagattttcatgcgagttcccaacaaaggaagcctcagcaaatcctagtattc
agggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagatc
attgaggcctgcaagtttctagatgaaaagtggtcgcccaagtttgttatcattgttgca
cagaaaaatcatcatacaaagtttttcccgtatggatctgctaataatgttccaccaggg
acaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccat
ggtggaatgattggtacgactcgacctacacattaccatgtgttgttagatgaagttggt
ttcaaacctgatgaacttcaagaacttgttcataatctgtgctatgtgtaccagagaagc
actactgcaacatccattgtggctccgataggctatgcccatttagccgctgcacaggtt
ggacagtggatgaaatccgagggcacatcagagacatcatcaagccaggatggtctgaga
aatgctggtccagttactgttcctcagttgcccagacttcagaagaatgttgctagctcc
atgttcttctgttga
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