Solanum lycopersicum (tomato): 101246636
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Entry
101246636 CDS
T02665
Name
(RefSeq) autophagy-related protein 18d
KO
K22991
WD repeat-containing protein 45
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101246636
Membrane trafficking [BR:
sly04131
]
Autophagy
Other autophagy associated proteins
Others
101246636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_2nd
BCAS3_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
WDR55
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
101246636
NCBI-ProteinID:
XP_004240839
UniProt:
A0A3Q7HMK3
LinkDB
All DBs
Position
6:33652049..33663512
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AA seq
416 aa
AA seq
DB search
MTTLSSLNSSTVSPSGGTISPAAFGTYESPMPGDSHSGHSEPAITDNDETELHFVSWNQD
YSCFAAGTSRGFRVYNCDPFKETFRRDLKSGGFGIVEMLFRCNILALVGAKANTQYPPNK
VIIWDDHQSRCIGEFSFRSEVRAVKLRRDCIVVVLEHKIYVYNFMDLKLLHQIETVANPR
GLCCLSHQLSTSVLACPGLRRGQVRVEHFGLNMTKLIKAHDSQIACLTLTIDGLLLATAS
TRGTLIRLFNTIDGTQLQEVRRGVDRADICSIALSPNVQWLVVSSDKGTIHVYSLRVRVV
GEDASADAAVRTPTLLCQNSSSSLDALISPSTGANPGSSLSFMKGVLPKYFSSEWSFAQF
HLPECTQYIAAFGSQNTIITAGTDGSFYRCSFDPVNGGEMVQQEYVRFLKTESRPR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgactacgctatcatccctcaatagttcaactgtttcaccttctggagggacaatttct
ccagcagcctttgggacatatgaatctcccatgcctggggactctcattctggccattct
gaaccggcgatcactgataatgatgaaacagagctacactttgtatcatggaatcaggat
tacagttgctttgctgctggcacaagtcgtggctttcgtgtgtataactgtgatcctttc
aaagagactttcagacgtgatctgaaaagtggtggatttggaatagtggagatgctgttc
cgatgcaatattttagcacttgtgggtgccaaggccaacactcaatacccacctaataaa
gttattatatgggatgatcatcaaagccggtgcataggcgaattttcatttaggtccgag
gttcgtgcagtgaaactaagacgggattgtattgttgtagttcttgagcacaagatatat
gtctacaactttatggatctgaagcttcttcatcagatagagactgtggccaatcctagg
ggactttgctgcctctcacaccagttaagtacatctgtattggcttgcccaggccttcga
agaggacaggtccgggttgaacattttggcctgaatatgacaaaattaatcaaggcacat
gattcccagatagcatgcctaaccttgacaattgatgggctgcttcttgcaacagcaagc
actcggggaactttgataagactcttcaacaccattgatgggactcagttgcaagaggtg
cgtagaggggttgacagagcggatatctgtagtattgctctatcaccaaatgttcagtgg
ttggtcgtctcgagcgacaaaggtactatccatgtatacagccttagagtacgtgttgtt
ggagaggatgcttcagctgatgctgctgttagaactccaacattgttgtgtcagaattca
tcatcttctcttgatgcacttatttctccaagtactggagccaaccctggttcatcactg
tctttcatgaaaggagttctgccaaaatactttagctctgaatggtcatttgctcaattt
catttgccagaatgtacccagtacattgctgcatttggttctcagaacaccattataact
gctggcactgatggaagtttctataggtgcagcttcgatcctgtgaatggaggagaaatg
gtacagcaggaatatgtccgctttctgaaaacagaaagtaggccgagatag
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