Solanum lycopersicum (tomato): 101246720
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Entry
101246720 CDS
T02665
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101246720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101246720
03012 Translation factors [BR:
sly03012
]
101246720
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101246720
Translation factors [BR:
sly03012
]
Eukaryotic type
Release factors
101246720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
She2p
Motif
Other DBs
NCBI-GeneID:
101246720
NCBI-ProteinID:
XP_004239730
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All DBs
Position
5:68200776..68204754
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AA seq
437 aa
AA seq
DB search
MADGQENDKNIEIWKMKKLIKALQSARGNGTSMISLIIPPGDQISRITKMLAEEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLLLYTGTIVTDDGKEKKVTFDLTPFKPIN
ASLYLCDNKFHTEPLGELLESDEKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKFFEEISQDTG
KYVFGVDDTIKGLEMGAVETLIVWENLDINRYVLKNSVTNEIVIKHLNKEQEADNSNFKD
SATSAELEVQDKMPLLEWFANEYKTFGCSLEFVTNRSQEGSQFCRGFGGIGGILRYQLDM
RSFDEPSDEGEYFVDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggccaagaaaatgataagaatattgaaatatggaaaatgaaaaaattaatc
aaagccctacaatctgccagaggaaatggcaccagcatgatctctcttatcataccccct
ggtgatcagatatctcgtattaccaagatgctggcagaagaatatggtactgcatcaaat
attaagagcagagtaaaccgtcagtctgtgcttggtgcaataacgtctgctcagcagagg
cttaaactttataacaaagttcctcctaatggtttgctgctttacactggaactatagtg
acggatgatggaaaggaaaagaaggtcacctttgatcttacgccttttaaacccataaat
gcgtctctatacttatgtgacaacaaatttcatactgaacctcttggtgaattgttggaa
tctgatgagaagtttggtttcattgtcatggatggtaatgggaccctttttgggaccttg
agtggcaacacccgagaagttcttcataagttcactgttgatctcccaaagaagcatgga
agaggaggtcaatcagctcttcggtttgctcgtcttcgaatggagaaacgtcataattat
gtgagaaagacagcagagcttgctactcaattcttcattaacccagccactagccagcca
aatgtatctggactaatacttgctggatcagctgatttcaagacggagctaagccaatct
gatatgtttgatccacgtctacaagcaaagatacttaatgtggttgatgtgtcctatggt
ggagaaaatggcttcaatcaggcaatcgagctgtctgcagagatactggcaaatgtgaag
tttatacaagaaaagcgcttgatagggaaattctttgaggaaatcagtcaagatactggc
aagtatgtattcggtgtggatgacacaataaaaggtttggagatgggagctgttgaaact
ctaattgtgtgggaaaatcttgatataaaccgttacgtattgaaaaacagtgtgactaat
gagatcgtcattaagcacctaaacaaggagcaagaggctgataatagtaactttaaggat
tctgccacatcagctgaattggaggttcaggataaaatgcccctgttggagtggtttgcc
aatgaatacaaaacttttggttgttcacttgagtttgtcactaacaggtctcaagagggg
tcacagttctgcagaggatttggtggcattggaggaatccttcgctaccagcttgacatg
cgttcctttgatgagccatctgatgaaggagaatactttgtggattctgattaa
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