Solanum lycopersicum (tomato): 101246723
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Entry
101246723 CDS
T02665
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101246723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101246723
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101246723
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
101246723
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
PHD_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
101246723
NCBI-ProteinID:
XP_004240070
UniProt:
A0A3Q7HES6
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Position
5:63968070..63972800
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AA seq
331 aa
AA seq
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MELDSIECVSSSDGMIDDDEIPLHHPHIIHSQYSSSKTSNNNNINNSSSNNDGIAAIHST
TSVHELLECPVCTNSMYPPIHQCHNGHTICSTCKARAHNRCPTCRQELGDIRCLALEKVA
ESLELPCKYGSVGCPEIFPYYSKLKHESVCNFRPYSCPYAGSECSVVGDIPYLVTHLRDD
HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFNCFGQCFCLHFEAFQLGTAPVYMAFLR
FMGDEMEARNYSYSLEVGGNGRKLTWEGTPRSIRDSHRKVRDSHDGLVIQRNMALFFSGG
ERKELKLRVTGRIWKEQQNLDGGACMPNLCT
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggagttggatagcattgaatgtgtatcatcttcagatggtatgatagatgatgatgag
atccctttacatcacccacatattattcattctcaatattcatcttcaaagacatccaac
aacaacaatattaacaatagcagcagcaataatgatgggattgctgcaattcattctaca
acaagtgttcatgagcttcttgaatgccctgtttgtacaaattctatgtaccctccaatc
catcagtgtcacaatggacacacaatctgttcgacatgtaaagcgagggctcacaaccga
tgtcccacttgtagacaggagcttggagatatcagatgtttagctctggaaaaggtggct
gaatcgcttgagctcccttgcaaatatggctctgttggctgtcctgaaatatttccttat
tacagtaagctaaaacatgagtcagtttgcaactttagaccatacagctgcccgtatgct
gggtctgagtgctcagttgttggtgatattccttacttggttactcatttgagggatgat
cacaaggtagacatgcactcaggatgcactttcaaccatcggtatgtcaaatctaatccc
cgagaagtagaaaatgcgacgtggatgttgacagttttcaattgttttggtcagtgtttc
tgtctccattttgaagcctttcagctgggaacagctcctgtatacatggcgtttcttcgg
tttatgggagatgagatggaggctcgaaactatagctacagcctggaagttggaggtaat
ggaagaaaacttacttgggagggtacgcccagaagtataagagacagtcacagaaaagta
agggatagtcatgatgggctcgtcatacaacgtaacatggcccttttcttttctggaggg
gagagaaaggagcttaagttacgagtaactggaaggatatggaaggaacagcagaatctt
gacggaggagcatgtatgcccaacctctgtacttaa
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