Solanum lycopersicum (tomato): 101246909
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Entry
101246909 CDS
T02665
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101246909
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101246909
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Pectate_lyase_3
NosD
Motif
Other DBs
NCBI-GeneID:
101246909
NCBI-ProteinID:
XP_004236194
UniProt:
A0A3Q7FRV2
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All DBs
Position
3:64893347..64895932
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AA seq
435 aa
AA seq
DB search
MGLPKRNLFLFFVLVVLVVSIEAHIKEFDEVWKKRAQQAKKAARHAYNPNPKIVADHLNY
QVDKAVRGSKSRRRDLQRYSGKCMATNPIDQCWRCDPNWARNRMKLTDCVLGFGRKTTGG
KGGKIYVVMDNSDNELVNPKPGTLRHAVIQPEPLWIIFAKNMVIKLNQELIMTSNKTIDA
RGRQVHIAHGGGLMLQFIHNVIISNLHIHDTKAGAGGLIRDSVSHYGYRSKSDGDGISIF
GSTNVWIDHISMSNCQDGLIDAVEGSTAITISNCHFTKHNDVMLFGASDTASGDSVMQIT
LAFNHFGHGLTQRMPRVRWGFVHVVNNDYTHWLMYAIGGSMHPTILSQGNRFIAPPNPNA
KEVTKRDYAPENVWKNWVWKSQGDLMMNGAFFVESGDPKHAFLKGPDMITSKPGSSVSSL
TQFSGSLKCIEGRPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggattaccaaagcgtaatttgtttttattctttgttttggttgttttagttgttagc
attgaggcacatattaaggaatttgatgaggtgtggaagaagcgagcccagcaagcaaag
aaggctgctcgacatgcctataatcctaatcctaagattgttgctgaccatcttaactac
caagttgacaaggctgtacgaggcagcaaaagcagaagaagggacctgcaaaggtacagc
ggaaaatgcatggctactaatcctatcgaccagtgctggaggtgtgatccaaactgggct
cggaaccgcatgaaactaacagattgcgtccttggctttggccgcaagacaacgggaggc
aaaggtggaaaaatctatgtagtaatggacaattcagacaacgagttagttaatcctaag
ccgggcacattgcgccacgctgtcatccagccggagccactttggattatatttgctaag
aacatggtaattaagcttaaccaggagcttatcatgacaagcaacaagacgattgatgct
cgaggaaggcaagtacacattgctcatggtggtggccttatgttacagtttatacacaat
gtgattattagtaaccttcacattcatgatactaaggctggtgctggtgggttaattaga
gactctgtcagtcattatggttatcgatcgaaaagtgatggtgatggcatttcaatcttt
ggatcaacaaatgtttggatcgatcacatttccatgtccaattgtcaggatggtctaatt
gatgctgttgagggttccacagccattaccatttccaattgccatttcaccaagcataat
gacgtcatgttgtttggtgccagtgatactgcctcaggggactctgttatgcaaataaca
cttgcattcaatcactttgggcacggtttgacgcagaggatgccgagagttagatgggga
tttgttcatgttgtcaacaatgattacacacattggcttatgtatgccattggaggaagc
atgcatcccaccatccttagccaggggaatcgttttatcgctcctccaaatcctaatgcc
aaagaggtgaccaaaagagactatgcacccgagaatgtgtggaagaattgggtgtggaaa
tcacagggagatcttatgatgaacggagcattcttcgtagaatctggagatccaaaacat
gcattcttgaaaggtcctgatatgatcacctccaagccaggatcatccgtgagcagcctg
acgcaattttcaggctctctcaaatgcattgagggaaggccttgttag
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