KEGG   Solanum lycopersicum (tomato): 101246913
Entry
101246913         CDS       T02665                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sly01009]
    101246913
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sly03036]
    101246913
Enzymes [BR:sly01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     101246913
Protein phosphatases and associated proteins [BR:sly01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101246913
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101246913
SSDB
Motif
Pfam: JmjC FYRC zf-C5HC2 JmjN FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 101246913
NCBI-ProteinID: XP_004236784
UniProt: A0A3Q7GQD5
LinkDB
Position
4:complement(3875870..3884989)
AA seq 1191 aa
MGTELVRHCIKEEDMDISAIPPGFESLAPFTLKQVENNRLRINQSSTASESKSHRSQVET
NIEGNEDVKMMKSLRRKPGVNYGKYEKSSEDESGSDQNPSVRSSLPKGVIRGCEGCLNCQ
RVTARWRPEEASRPDLGDAPVFYPTEKEFEDTLTYMASIRSKAETYGICRIVPPVSWKPP
CPLEEKNVWEKSKFATRIQRIDKLQNRDSMRRMWEANIHKKKKRRRCLKPGVDLGNGSVD
NRNLGDAERFGFEPGPEFTLEAFQKYADDFKAQYFRQNEGQCPSLENIEGEYWRMVEKPT
EEIEVLYGADLETGVFGSGFPKHDHQVGSSDTKYLNSGWNLNNFPRLTGSVLTYESSDIS
GVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHFGAPKMWYGVPGADASKLEAAMRKHLPD
LFEEQPDLLHKLVTQLSPSILKSEGVPVYRCVQNPGEFVLTFPRAYHAGFNCGFNCAEAV
NVAPVDWLPHGQNAIEHYREQGRKTSISHDKLLLGAARDAVKAHWELNLLRKNTSNNLRW
KDVCGKDGVLSKALKNRVEMERVRREFLCNSSQALKMESTFDATNERECSVCFFDLHLSA
AGCHNCSPDKYACLNHAKQLCTCSWGAKFFLFRYDINELNVLVDALEGKLSAIYRWARQD
LGLALSSYVNKERQVAGIAGKLSLKPEESVLKEASAGPSIASVKKEKDDGTSALLMKASS
SAFSPHKDKLSREPLASESIKASSMPDNASHGIEGAQNGFQGRSESLKVGPVYRTPVTQL
SVEGGLCHKKLSTDKREVKGTSSLNDVVILLSDDEGDEMDNSIPSKDTAGKQTVNMGNND
KPVPTTSIDSARVTKDGINCSPSSESMKVEDNSKDEIHRGPNQDTHSFIGGSSVNMDIDR
HAQAPQVADTCPQSRQPFDCKPNKEGSQNKTMECAQPLSGDSPVSQNNLDRGFRQKGPRI
AKVVRRLACNVEPLDYGVIQPGKLWCDNRVIYPKGFRSRVRYIDVLDPTNMSHYISEVID
AGRDGPLFMVTLERCPNEVFVHLSPVKCWDMVRERVNQEILKQHKLGKPKLLPLQPPGSV
EGMEMFGFSTTEIVQAIQDMDINRVCSEFWKSKPLMQTVQSSLVVDRSKLNIKSEISNDP
TRADIVLSGLLKKANCEELHALNNLLKTNNLTPNQGLMTRLLNEEIDKRGR
NT seq 3576 nt   +upstreamnt  +downstreamnt
atggggaccgaacttgttagacattgcatcaaagaagaagatatggacatttcagcaatt
ccgcctggttttgagtcacttgcacccttcaccctaaaacaggtggaaaataatcgactc
aggattaatcagtcatccacagcgagtgagtcaaaatcacatagaagtcaggtagaaaca
aatattgaaggtaatgaagatgtaaagatgatgaagtcacttaggcgtaaacctggggta
aactatgggaaatatgagaaaagctcagaagatgaatctggttctgatcagaatccctct
gtaaggtcttcacttccgaaaggggtcatccgaggatgtgaagggtgtctcaactgccaa
agggtaactgcgagatggcggccagaggaagcttctaggcccgatcttggagacgctcca
gtgttctatccaactgaaaaggaatttgaagataccctgacgtatatggctagcatacgc
tccaaagcagagacatatggaatttgtcgcatagtaccacctgtttcgtggaaacctcca
tgccctcttgaggaaaaaaatgtatgggagaaatccaaatttgctacccgtattcagagg
attgacaaacttcagaatcgagattcgatgagaaggatgtgggaagctaatattcataag
aagaagaaaagaagaagatgcttaaaacctggagtagaccttggtaatggtagtgttgac
aataggaaccttggtgatgctgagagatttggatttgaacctggtccagagtttactctg
gaagcatttcagaagtatgctgatgactttaaggcccagtacttcaggcaaaatgaagga
caatgcccctccttggagaacatcgagggtgaatattggcggatggtcgagaaacccact
gaagagattgaggtgctttatggggctgacttggaaactggagtatttggaagtgggttc
cctaaacatgaccatcaagttggctcttctgacaccaagtatctgaactcagggtggaac
ttgaataattttccaaggcttaccggttctgttcttacatatgagagcagtgatatatct
ggtgtcttggtgccgtggctgtacataggaatgtgcttttcatcgttctgttggcatgtt
gaagatcaccatttatactcattaaattacatgcatttcggggctccaaaaatgtggtat
ggtgtgcctggcgcagatgcatcaaagttggaggctgctatgaggaaacacttacctgat
ctctttgaagagcagccagatcttcttcacaagctggttacacaactatctccctccata
ttgaagtctgagggagtcccagtgtatcgttgtgtgcaaaatcctggagagtttgttttg
accttcccaagagcatatcatgctggtttcaattgtggcttcaattgtgctgaagcagta
aatgttgctcctgttgattggttaccccatgggcagaatgcgattgagcattaccgcgag
caaggacggaaaacttccatatcccatgataaactattattaggagcagctcgagatgca
gtcaaagcgcactgggaacttaatttattgaggaagaatacctcaaataatttaagatgg
aaagatgtttgcggaaaagatggagttttgtcaaaagcattgaagaaccgagttgagatg
gagagagtcaggagggagtttctttgcaattcttcacaagcactaaagatggagagcact
tttgatgctactaatgagagggaatgtagtgtgtgtttttttgatctacacctgtccgca
gccggctgtcacaattgttcgcccgacaaatatgcatgcttgaaccatgcaaaacaactg
tgtacttgttcctggggtgccaaatttttcctcttccgttatgacatcaatgaattaaat
gtactagttgatgctttagaagggaaattgagtgcaatttatcgatgggcaagacaagat
cttggattagctttgagttcttatgtaaataaagagcggcaagttgcagggattgctggt
aaattatctcttaaacctgaggaatcagtgctaaaagaggcaagtgcaggaccctctata
gcttccgtgaaaaaggaaaaagatgatggaacttcagcactcttgatgaaggccagcagc
agtgctttttcaccgcataaagataaactatccagggagccattagcttcagaatcaatc
aaggcgtcctctatgcctgacaatgcttctcatggaattgagggggcacagaatggcttc
cagggcagaagtgaatccttaaaggtgggtcctgtttatagaactccagttactcagctg
tccgttgagggtggcttgtgtcataagaaattatcaacagataaacgtgaagtgaaggga
acttcaagtcttaatgatgttgtgatcctgctcagtgatgatgagggagatgagatggac
aattcaattccttcaaaagatacggcgggaaagcagacagtgaacatgggtaacaatgat
aaacctgtcccaacaacatcaatcgatagtgcaagagtcactaaagatggaattaattgt
tcacctagttcagagagcatgaaagttgaggataattcaaaagatgaaatacatcgtgga
cctaatcaagatactcattctttcattggaggttcgtctgtaaatatggatattgataga
catgcccaagcccctcaggttgcagatacttgtcctcagtcccgtcaaccattcgactgt
aaaccaaataaagaaggtagccagaataagaccatggagtgtgcacaacctttatcaggt
gactctcccgtctctcaaaacaatttggacagaggttttcgccagaaaggtcctcggatt
gcaaaagtggtgaggagactcgcttgtaatgtggaacctctggattatggagttatccag
cctgggaagttatggtgtgacaaccgggttatttatcccaagggattcaggagccgggtc
agatacattgatgttttagatccaacaaatatgtctcactatatttctgaagttatagat
gcaggacgagatggcccactgtttatggttacacttgagcgttgtcccaatgaagtgttt
gttcacttgtcccctgttaaatgctgggatatggtccgcgagagagtgaatcaagaaatt
ttaaagcaacataagttgggaaagccaaagcttttgcctttgcaaccacctggaagtgtt
gagggcatggaaatgtttggtttttcaacaacagagattgtacaggccattcaagatatg
gatataaaccgggtatgttctgaattctggaaatctaaacccttgatgcagactgtacaa
tcttccctagttgtggaccgttcaaaactcaatataaaatccgagatctcaaatgatcct
actcgagctgatatagttctgagtggcctacttaagaaggcaaactgtgaagaacttcat
gcattgaacaatcttctcaaaaccaataatttgacccctaatcaaggtttaatgactcga
cttcttaatgaagagattgataagcgaggtagatga

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