Solanum lycopersicum (tomato): 101246930
Help
Entry
101246930 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101246930
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101246930
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101246930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-rbx1
Prok-RING_4
zf-RING_6
zf-RING_16
zf-C3HC4_4
Sina_RING
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
101246930
NCBI-ProteinID:
XP_004240840
UniProt:
A0A3Q7GUR1
LinkDB
All DBs
Position
6:complement(33664671..33672960)
Genome browser
AA seq
434 aa
AA seq
DB search
METTTSSSVSDFDRNPNSNSNSSSSPHTSNSTAFGVNLSPLRVFRYPLSTFLEYSGLLRV
RPENPETDLLLPDNPTPNSSGSTTSSNGEVSIRIIGSGENDRVRTDDGSVMDGGEREEER
GSNVEGSTSSGSGNNRDSSYQRYDIQQIARWIEQFLPFSLLLLVVFIRQHLQGFFVIIWI
TAFMFRSNDILRKQTALKGERKITVLLGYFLVFMLHISGIYWWNHKDDIFYPLLMVPPKG
IPPFWHAIFIILVNDTMVRQAAMTLKLVLLMVYKNGRGHNFRRQGQLLTLVEYMLLLYRA
LLPTPVWYRFFLNKDYGSLFSSLITGLYLTFKLTSIVEKVRSFLTALKALSIKEIHYGSH
ATPEQVNAAGDLCAICQEKMNTPILLCCKHIFCEDCVSEWFERERTCPLCRALVRPADLR
SFGDGSTSLLFQLF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagactacgacttcttcaagcgtttcagattttgacagaaacccaaattccaattct
aattctagttcatctccacatacttcaaattcaacagcctttggagttaatctatctcct
ctccgggttttcagatacccactttctactttccttgaatattccggtttgctccgagtc
cgacccgaaaacccagaaaccgatttgctccttcctgataatcctactcccaactcctct
ggatcaactacttctagtaacggggaagtttcaattaggataattggctctggagagaat
gatcgggttaggactgatgatgggtcggtgatggatggtggggaaagggaggaggagagg
ggttcgaatgtggaagggtctacttcttctgggagtgggaataatagggattcttcatat
caaaggtatgatatacaacagattgcaaggtggattgaacagtttcttccattttctttg
ctacttttggttgttttcatccgccaacacttgcaaggtttctttgtcataatttggatt
acggccttcatgttcaggtcaaatgacattcttcgaaagcagacagctttaaagggggag
agaaagatcactgtccttcttggttattttctggtgtttatgcttcatattagtggaatc
tactggtggaatcacaaagatgatatattttatccgttacttatggttcctcctaagggt
atcccacctttctggcatgctattttcatcatcctggtaaacgatacaatggtgcggcag
gcagcaatgactttgaagttggtactgcttatggtttacaagaatggcaggggccacaat
ttccgcagacagggccaattgctgactctggtggagtatatgttgctcctataccgtgca
ctattaccaacccctgtctggtataggttctttctcaacaaagattatggaagccttttt
tcatcactgataacaggattgtacttgacgtttaagcttacatcaatcgttgagaaggtt
cggtcattccttactgctttgaaggcactgtcaattaaggaaatccattatgggtcacat
gccacacctgaacaggtaaatgcagctggtgatctatgtgctatttgccaagagaagatg
aatacaccaattctattgtgctgcaaacacatcttttgtgaagattgtgtctcagaatgg
tttgaaagagagagaacttgtcctttgtgtagagccttggtcagacctgctgatctaaga
tcttttggagatggatcaactagccttttattccagttattctaa
DBGET
integrated database retrieval system
