Solanum lycopersicum (tomato): 101246938
Help
Entry
101246938 CDS
T02665
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101246938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101246938
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101246938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
101246938
NCBI-ProteinID:
XP_004242776
UniProt:
A0A3Q7H7U1
LinkDB
All DBs
Position
7:4485038..4501375
Genome browser
AA seq
1481 aa
AA seq
DB search
MSGDNEIVMRDVTNAGLVVSDRIGRDVASQIDLEDALEASRYASHPYTAQPREWPPLVEV
VDSWELPSVLIERYNASSGEGTALCGVFPEIRRAWASVDNTLFLWRFDKWDGHCPEYSGD
EQAICVVGLAKVKPGIFVEAIQYLLILATPVELILVGVCCSASSDGTDPYAEVSLQPLPD
YTIPSDGVTMTCISSTDRGHIFLAGRDGHIYELQYSTGSGWQKRCRKLCLTAGLGSVISR
WVVPNVFKFGAVDPIVEMVIDNERHILYARTEEMKILMFSLGENGAGPLKKVAEERNLIN
QRDSYGGRQPAGSRAPRSAKTTIVSISPLSVLESKWLHLVAVLSDGRRMYLSTSSSGGTN
STAGSFGGLNHQKPNCLKVVTTRPAPPLGAGSGLPFGAVSLASRSQSEDLSLKIESAYYS
AGTLVLSDSSPPTVSSLLIVNRDSSSQSSSSSLGAGARSSRPLRELVSSLPIEGRMLFVA
DVLPLPDTAAAVQSLYLQLEFGYDNSGESCERTSGKLWARGDLSTQHILPRRRIVIFSTM
GMMEVVFNRPVDVLRRLLESNSPRSLLEDFFSRFGSGESAAMCLMLAARIIYTETLVSNV
AAERAAEAFEDPRLVGVPQLEGSGAFSNTRAPAGGFSMGQVVQEAEPVFSGAHEGLCLCS
SRLLLPLWELPVFITKGGITSSEAFDNVVVVCRLPGETMQILEDKIRSLEKFLRSRRNQR
RGLYGCVAGLGDLTGSILIGTGSDMGAGDRSMVRNLFGSYARNVESNEGGSSNKRQRLPY
SSAELAAMEVRAMECIRQLLLRCGEAIFLLQLLTQHHVTRLIQNFEANIKQALVQLTFHQ
LVCSEEGDRLATRLVSALMEHYTGPDGRGTVDDISGRLREGCPSYYKESDYKFYLAVESL
DRAAATLDAEERENLAREAFNYLSKVPESADLRTVCKRFEDLRFYEAVVLLPLQKAQALD
PAGDAFNEQIDAGIRDLALAQREQCYEIIFSALHSLKGEASKREFGSPIRPIAQSTLDQT
SRKKFICQIVQLGVQSSDRIFHLKLYQTLIDLGLEDELLEYGGPDLVPFLQNSGREPTNE
VRAVSAVASPTSPLAHARVPALSNQAKYFELLARYYVLKRQHVLAAHVLVRLAERRSTDA
GDAPSLEQRRQYLSNAVLQAKSAHDTDGMSGSARGALDNGLLDLLEGKLAVLQFQIKIKD
ELEAMSSRLESSTSTSESGSGETSPNMSNILREKAKELSMELKSITQLYNDYAVPFEIWE
ICLEMLYFASYSGDADSSILRETWARLIDQALMRGGIAEACAVLKRVGSHVYPGDGAVLP
FDTLCLHLEKAALEQVVSGAESVGDEDIPRALLAACKGAVEPVLNTYDQLLLSGAMLPTP
NLRLRLLRSVLALLREWALSVFAQGMGTSVTGASLILGGTLSLGQTAVGNQGVRDKITSA
ANRYMTEVRRLPLPQNQTEAVYRGFRELEESLLSPFPFERF
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggacaatgagattgtaatgcgtgatgttactaatgccggacttgtagttagt
gaccgcattggccgtgatgtagcttctcaaatcgatcttgaagatgcattggaagcttct
agatatgctagtcatccttatactgctcaaccccgtgagtggcctcctttagtggaagtc
gtggactcttgggagttgccttctgtattgattgagagatataatgcatccagtggagaa
ggaactgcattatgtggagtatttcctgaaattcgcagagcttgggcatcagtggacaac
acattgtttctttggcggttcgataagtgggatggtcactgtcctgaatatagtggcgat
gaacaagctatatgcgttgttggcctagccaaagtcaaacctggaattttcgtggaggcc
atccagtatcttctgatcttggcaactcctgttgagttgatccttgtaggtgtatgttgt
tctgcaagcagtgacggaactgatccatacgctgaggtgtcacttcagccattaccagat
tatacaattccatctgatggagtgaccatgacatgtataagttccacagatagaggtcac
attttccttgctggccgtgatggccacatttatgaattgcagtactcaactggttcgggg
tggcagaagcgatgccgcaagctctgtctaactgcaggtctcggaagtgtcatatcaagg
tgggtggtgccaaatgttttcaagtttggagccgtagatcccattgttgaaatggtcatt
gataatgagagacacatcctatatgcacgtaccgaagagatgaaaattctgatgttttct
cttggagaaaatggggctggaccccttaaaaaagtagcagaagagagaaatttgataaat
cagagggattcttatggtggtaggcaaccagctggttcaagggctcctagatcagccaaa
acaaccattgtttccatctcaccgttatctgtcttagaatcgaaatggctacatcttgtt
gctgtgctatcagatggcagaagaatgtatctttccacgtcttcttctggtggaaccaat
agtactgctggaagtttcggtggtcttaatcatcaaaagccaaactgcttaaaagttgta
acgactaggccagctcctcctcttggggcaggtagtgggcttccatttggagctgtatct
cttgctagtagatcacagagtgaagatctgtcactgaagatagaatcagcctattattct
gctgggactcttgtcctttctgattcatctccaccgactgtttcttctcttcttattgta
aatcgggattcaagttctcaatcttcttcaagtagcttgggagcaggtgctaggagttct
cgcccactccgtgaattggtgtcatccctgcccattgaaggaaggatgcttttcgtggct
gatgttctacccctaccagatacagcagccgcggtgcagtcactttatttacagctggag
ttcggctatgataactcaggggaatcctgtgaaagaacttcgggtaaactttgggctaga
ggtgatctttcaacccaacatatattaccaagaaggagaatcgtcatattcagcactatg
ggtatgatggaagtagtttttaacagaccagtcgatgtactcaggagactattggaatcc
aattcgcctaggtcattattagaggatttcttcagtcgttttggatctggagagtctgct
gccatgtgtttaatgcttgctgcgaggataatctatactgagaccttagtaagtaatgtt
gctgctgagagggcagctgaagcttttgaggatccaagacttgttggagtaccacagcta
gaaggtagtggtgcattttcaaatactagagctccagctggaggatttagcatgggccag
gttgtgcaggaagctgagcctgttttctccggtgctcatgaaggtctttgcttatgctca
tcaaggttacttctacctttgtgggagcttcctgttttcatcactaaaggaggcataact
tcttcagaagcatttgacaatgtagtagttgtctgccgacttcctggtgagaccatgcaa
atcctggaagacaagatacgttctttagagaagttcctgagatctaggaggaaccagaga
aggggactttatggttgtgttgctggcttaggtgacttgacaggctcaattttgattgga
actggctcagatatgggggctggtgacagaagtatggtaagaaatctatttggatcttat
gctcgcaatgtcgagtccaatgaaggtggatcttcaaacaaaaggcaacgacttccttat
agttctgcagaacttgctgccatggaggttagagccatggagtgtatcaggcaattgctc
cttagatgtggcgaagccatattcttgctgcaacttcttacacaacatcatgtgacacgc
ttgattcaaaattttgaagctaatatcaagcaggccctagttcagttgacattccatcaa
ctagtttgttcagaagagggagatagacttgctacgagacttgtatctgccctcatggag
cattacactggtccagatggcaggggaactgttgacgacataagtggtagactacgagag
ggttgcccaagttattacaaagaatctgattacaagttctacttagcagttgaatctctt
gatagagctgctgctacattagatgcagaggagagagaaaaccttgcgagagaggcattc
aactacctaagcaaagttccagagtctgcagatctgcggactgtatgtaaacgttttgaa
gatctgagattttatgaagctgtggtcctattacctctgcaaaaggcacaagctcttgac
cctgctggtgatgcttttaatgagcaaatagatgctggaattcgagatcttgcacttgct
caacgtgagcagtgctatgagattattttcagcgccttgcattctttaaaaggtgaagct
tcaaagagggaatttggatctcctatcagacctattgctcagtctactcttgatcaaact
tctcggaaaaagttcatttgccagattgtccaacttggtgtgcaatcttcagacagaatt
tttcatctgaagctgtatcaaactttaatcgatttgggcctggaagatgaactacttgaa
tatggtggccctgatttggtaccttttctgcaaaattctggtcgtgaacctacaaatgag
gttcgtgctgtctctgcagtggcatctccaacttcaccattggctcatgctagagtacct
gcactatccaaccaagccaaatattttgagcttttggctcgttattatgttttgaagaga
caacacgttcttgcagcccatgttttggtgaggctggcagaaaggcgctccactgatgca
ggggatgctcctagtttagaacaaaggcggcaatacttgagtaatgctgttttgcaagca
aagagtgcccatgacactgatggtatgagtggttctgcgcggggtgctcttgacaatggg
ctgcttgatttgctcgaaggaaagcttgctgttcttcagtttcaaattaaaattaaagat
gaactggaggctatgtcttccaggttagagtcatctacaagcacatctgaatctggttct
ggtgaaacatcacccaatatgagtaatattcttcgagaaaaagcgaaggagctatcaatg
gaattgaagagcattacacagttgtataatgactatgctgttccttttgagatatgggag
atatgcctggagatgttgtacttcgctagctactccggtgatgctgatagcagcatactg
cgagagacatgggctaggctcattgatcaagctcttatgaggggtgggattgctgaagct
tgtgctgtactgaagagggttggtagccatgtgtatcccggagatggagctgttttacca
tttgatactctctgtcttcaccttgaaaaggctgcactggagcaagtggtttctggtgct
gaatctgttggggatgaagatattcctagggctcttttagctgcttgcaagggtgcagta
gagcctgtattaaatacttatgaccagctgttattaagtggggcaatgttaccaactccg
aatcttagattgcgtctcctgcgctccgtactggctttacttcgtgaatgggcactttct
gtcttcgcacagggaatgggtacaagtgttactggagcctctctgattcttggtggaact
ttatcattaggacagactgcagttggtaatcaaggtgttcgcgataaaataacaagtgca
gcaaatcgatatatgacagaagtgcgaagattacctcttccacaaaatcaaactgaagct
gtttatcgaggttttcgtgaacttgaagaatcattgttaagtccattcccttttgaacgg
ttttga
DBGET
integrated database retrieval system
