Solanum lycopersicum (tomato): 101246991
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Entry
101246991 CDS
T02665
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101246991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101246991
Spliceosome [BR:
sly03041
]
Common components
Common spliceosomal components
SR proteins
101246991
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
101246991
NCBI-ProteinID:
XP_004251258
LinkDB
All DBs
Position
11:60996249..61001613
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AA seq
354 aa
AA seq
DB search
MRPIFCGNVEYNARQSELERLFRRYGRVDRVDMKSGFAFVYMDDERDAEDAIRGLDRIEF
GRKGRRLRIEWSKEERNGRRPETSRKSSSSVKPSKTLFVINFDPYSTRSRDIERHFDPYG
KILNIRIRRNFAFVQYETQEDATRALDATNMSKLMDQVITVEYANKDDDDRRNGFSPDRN
RDRGLKRGYDRGRSRSPYGRERGSPDYGRGRARSPSPIRQGRSSPDYGRRPSPNPNHRER
DSEYGSGRSPNMRKERNPDHGNGHSPNPRRLRAGSENGEVHSPPEEGLLESGPSPPRVGR
RGKYSPDDYRGCSRSRSPRSKPEEIGSPRYGAAESPLPERHRSLSPPTRERSRS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaattttctgtgggaatgttgagtataatgccagacagtcagagttggagagg
cttttcagaagatatgggagagtggatagagtggatatgaaatctggttttgcttttgtg
tacatggatgatgaaagagatgccgaggatgctattcgtggactcgaccgtatagagttt
ggcagaaagggacgcagacttcgcattgaatggtcaaaggaagagcgtaatggtaggagg
ccagagacttcaaggaaatcttcatctagtgtcaaaccttcaaaaactttgtttgtcata
aattttgatccatatagtactaggagcagggatatagagaggcactttgatccatatgga
aaaatactcaatataaggattagaagaaattttgcatttgttcaatatgaaactcaggag
gatgctactagagccttggatgctacaaacatgagtaaactgatggatcaagtcattaca
gttgaatatgcaaataaagatgatgatgacaggagaaatgggtttagccctgatagaaac
cgagataggggtcttaagagaggttatgaccgaggtcgatctcggagtccttatggaaga
gagagggggagtcctgattatggtcgtgggcgggcccgtagcccaagtccgatccgtcaa
ggtaggtcaagccctgattatggtcgtcgacctagtcctaatcccaatcatagggaaagg
gattctgagtatggcagtggccgtagtccaaacatgagaaaggagaggaaccctgatcat
ggaaatggccatagtccaaaccctcgtaggttgagagctggttctgaaaatggtgaggtg
cacagtccaccagaggaaggacttctggaatctggccctagtccccctagggtggggagg
agagggaaatatagcccggatgattatcgtggctgtagccgtagccgtagcccaaggtct
aaacctgaagaaataggtagtcctagatatggtgcagcagaaagtcctcttccagaacga
cacaggagcctttcacctccaactcgagaaagatcccgctcctag
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