Solanum lycopersicum (tomato): 101247006
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Entry
101247006 CDS
T02665
Name
(RefSeq) ribonuclease TUDOR 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
sly
Solanum lycopersicum (tomato)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
101247006
NCBI-ProteinID:
XP_004235861
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Position
3:complement(63860500..63868045)
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AA seq
978 aa
AA seq
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MASTGWLKGRVKAVPSGDSLVIMGSSKAEIPPEKSITLGSLMAPRLARRGGVDEPFAWQS
RDFLRKLCIGKEVTFKVEYTVPSIGREYGTVFIGDKNVSMLVVAAGWAKVREQGQQKDAN
PYLKPLQDAEEQAKQQGLGRWSRAPGASEASIRNLPPSAIGDSSNFDAMGLLERSKGKLI
EAFVEQVRDGSTLRVYLLPDFQFIQVFIAGIQAPTMGRRATSETVINASVTSDEPNGEST
TENRAAPTSAQRLASSAASVTEVAPDPYGREAKHFTETRVLNRDVRIVLEGVDKYSNLIG
SVYYPDGESAKDLGLELIENGYAKYVDWSANMLEVEAKKKLKSAELDAKKTRLRIWTNYV
APATNSKAIHDQNFTGKVVEVVSGDCLVIADDSLPFGDPSAERRVNLSSIRSPKMGNPRR
DEKPAPYAREAKEFLRNRLIGKQVHVSMEYSRKVGMADGPAAPTSGADSRVMDFGTVFLA
SKDGDDASPAPSAAGSQLAGVNVAELLVARGFATVVRHRDFEERSNYYDALLSAESRATS
GKKGIHSPKEAPVMHVTDLLTAASKKARDFLPFLQRNRRMSAVVEYVLSGHRFKLFIPKE
TCSIAFSISGVRCPGRDEPYSEEAIALMRRKIMQRDVEIEVETVDRTGTFIGTLWESRSN
VAVTLLEAGLAKLQTSFGTDRIAEVHLLMQAEQAAKRQKLKIWENYVEGEEVVSSGTAER
RQKEEVKVTVTEILGGGKFYVQLVSDQKVAAIQKQLASLNLQEAPVIGAFNPKKGDMVLA
QFSADNSWNRAMIVNAPRGAVESSKDKFEVFYVDYGNQEVVSYSQLRPLEASVSASPGLA
QLCSLAHVKVPGLEDDYGQEAAYRLSELLLSGPKEFRAVIEEKDASGGKVKGQGTGTVFQ
VTLVDPESDISINATLLKEGLARMEKRKRWEPKDKQQALDELEKYQTEAREKRFAMWEYG
DVESDEEDIPARKPAGRR
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacaggatggttgaagggaagagtgaaagctgttccctctggtgacagtttg
gtgataatgggtagttccaaggctgaaatcccccctgaaaaatctataaccttgggatct
ctaatggctccacgtttggcacgtcgtggtggagtggatgagccatttgcatggcaaagc
agagacttcttgaggaagctttgcattggaaaggaagtcactttcaaggtggaatacact
gtaccttccatagggcgagaatatggaactgtttttattggtgacaagaacgtttccatg
ctagttgttgctgcaggctgggccaaggtcagggagcagggtcaacagaaagatgctaat
ccttatttgaaaccactgcaagatgctgaagaacaagccaaacaacaaggtctaggtcgt
tggagtagggcccctggtgcttctgaggcatctattaggaatcttcctccatctgcaatt
ggtgattctagtaattttgatgcaatgggactattggagcgaagtaaaggtaagcttata
gaagcatttgttgagcaagttcgtgatggtagtacactgcgagtgtacttgcttccagac
ttccagttcatccaagtgttcatcgctggaatacaggcaccaacgatgggaagaagagca
acatcagaaactgttatcaatgccagtgttacctctgatgaaccaaatggagaatcaact
actgaaaatcgtgcagctccgacatcagcgcagaggttggcatcctcagctgcatctgtt
acagaagttgcacctgatccttacggcagagaagcaaagcattttaccgaaactcgtgtc
ttaaatagagatgttcgaattgtcctggagggtgttgacaagtatagcaatctaattggc
tcggtgtactaccctgatggagaatcggcaaaggacctgggattggagcttattgaaaat
ggttatgctaaatatgttgattggagtgccaacatgctggaagttgaagccaagaagaaa
ctgaaaagtgctgagcttgatgccaaaaagactcgcttgagaatctggacgaactatgta
gctccagcaacaaattccaaggctattcatgaccaaaatttcacgggaaaggtggttgag
gttgtcagtggagattgtcttgttatagctgatgattctctgccatttggagatccatca
gcagaacgaagagtcaatctttcaagtattaggtctcctaaaatgggaaatcctcgtaga
gatgagaaacctgctccctatgctcgggaagcaaaggagtttttgagaaatcgccttatt
ggaaaacaggtgcatgtttccatggagtactcacggaaggtcggcatggcagatggacct
gctgctcccaccagtggtgcagattcaagggtgatggattttggaactgtattcctggca
tccaaggatggggatgatgcatcacctgctccatctgctgcaggcagccagttggctgga
gtcaatgttgctgagcttttggttgcccgcggttttgcaactgttgtcagacatcgtgat
tttgaagaacgttcaaactactacgatgcccttctctccgcagaatcacgtgctacttct
gggaaaaagggtattcattctcctaaagaagctccagtgatgcatgtaacagacctgcta
acggctgcgtcaaagaaagctagagactttttgcctttcttgcagcgcaacaggaggatg
tctgctgtagtagaatatgtcctcagtggtcatagattcaaactgttcattcccaaggag
acttgcagcattgctttctctatttctggagtgagatgcccaggacgtgacgagccctac
tctgaggaagccattgccttgatgaggcggaagataatgcagagggatgtcgagatcgag
gtagaaacagttgacagaacagggactttcattggaacattatgggaatcaagatccaat
gtggcggtgactctactggaagctggtttagcgaagcttcaaacttcttttggaactgat
agaattgccgaagttcacctcctcatgcaagctgaacaggccgccaaaaggcagaaattg
aagatatgggagaattatgtcgagggagaggaagttgtcagtagtggaacagctgaaaga
cgccaaaaagaagaggtgaaggtcactgtcactgaaattctgggtgggggtaaattttac
gttcagttggtttccgaccagaaagtagctgccattcagaagcaacttgcttctctaaat
cttcaggaggctcctgtcattggtgcatttaatcccaagaagggtgatatggttcttgct
caattcagtgctgataattcatggaaccgagcaatgattgtcaatgcccctcgtggtgct
gtggaatcttccaaggacaagtttgaagttttctatgttgattatggaaaccaagaagtt
gtttcatatagtcagttgcggcctcttgaagcatctgtgtccgccagtcctggtcttgct
caactctgcagtcttgctcatgttaaagttcctgggctagaagatgattatggtcaggag
gcagcataccggctaagtgagcttcttctaagtgggccaaaggaatttagagctgttatt
gaggagaaagacgcttcaggtggaaaagttaaaggtcaaggaacagggacagtctttcag
gtgactttggttgatcctgaaagtgatatcagcataaatgctaccttgcttaaggaagga
cttgctaggatggagaaaaggaagaggtgggagcccaaggacaaacaacaggctctggat
gaattggagaagtatcaaacagaagcacgagaaaagaggttcgcaatgtgggagtatgga
gatgtcgagtcagatgaggaggatatccctgctaggaaacctgctgggagacggtaa
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