Solanum lycopersicum (tomato): 101247256
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Entry
101247256 CDS
T02665
Name
(RefSeq) serine/arginine-rich-splicing factor SR34 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101247256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101247256
Spliceosome [BR:
sly03041
]
Common components
Common spliceosomal components
SR proteins
101247256
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
101247256
NCBI-ProteinID:
XP_004247420
LinkDB
All DBs
Position
9:complement(64213579..64219609)
Genome browser
AA seq
310 aa
AA seq
DB search
MSRSSRTLYVGNLPGDVREREVEDLFYKYGPIAHIELKIPPRPPGYAFVEFEEARDAEDA
IRGRDGYDFDGHRLRVELAHGGRGNSSSNDRYGGGGGGRGQRGGGVSRRSDYRVLVTGLP
HSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIIDYTNYDDMKYAIKKLDDSEFRNAFSR
ATIRVKEYDRSRSRSRSRSRSRSYSRGKSVSRSRSRSRSRSRSKSKSKSPKVKSSKRSRS
RSRSVSSQSRSGSKGRPVSRSPSRSRSPAPARSKQLSESPKRRTPSSSPKRRTPSRSPSR
SRSRSQSLSR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggtcgagtaggacactttatgttggcaatcttcctggtgatgttcgtgagcgt
gaagtggaagatctcttttacaagtatggaccgattgcacatattgagctgaaaattcca
ccaagaccccctggttatgcttttgttgagtttgaagaggctcgtgatgctgaagatgct
attcgtggtcgtgatggctatgattttgatgggcaccgtctgcgggttgagcttgcacat
ggcgggcgtggtaactcatcatcaaatgatcgttatggtggtggcggtggcggccgtggt
cagcgtggtggaggagtgtcaagacgttcagattatcgagtgttagttacaggattaccc
cattcagcatcgtggcaggatctcaaggatcacatgcgccgtgctggggatgtttgtttc
tcccaagttttccgtgacgggagtggaaccactggtataattgattatacaaactatgat
gacatgaaatatgctatcaaaaagcttgatgactctgagtttcgaaatgccttttctcgt
gcgacaattcgagttaaagaatatgaccgcagtcgaagtcgcagccgcagtcgcagtcgc
agtcgctcttactccagagggaagagtgttagtcgaagccgaagccgtagccgaagtaga
agccgaagcaagagcaaaagcaaatctcctaaagttaagtcttcaaagcgctcaagatct
cgttcaaggtctgtgtcttctcagtctcgttctgggtcaaaaggacgtcctgtctcaaga
tctccatcaaggtccagatcaccagcaccagctcgttcaaaacaattaagtgaaagtccc
aaaagacgcactcccagcagtagccccaaaagacgcactccaagcagaagcccaagccgg
agtaggagccgtagccaaagtttgtccaggtaa
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