Solanum lycopersicum (tomato): 101247626
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Entry
101247626 CDS
T02665
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
101247626
Enzymes [BR:
sly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
101247626
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
101247626
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Motif
Pfam:
PPR_long
PRORP
PPR_2
PPR_3
TPR_24
RNase_Zc3h12a
PPR_1
Motif
Other DBs
NCBI-GeneID:
101247626
NCBI-ProteinID:
XP_004241814
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Position
6:complement(43342202..43347687)
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AA seq
567 aa
AA seq
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MLVRRMGYISPSLSIKTSPFFSILTKNPFPFHHLHPIQFFKPIHTKSPQTHLFSMNQKPH
FTTSAAFLQEPTNTKTLSNRSAKKARRDAPESVLRHQLDQCSKRGDLQEAIRLYEEAKLN
NITLNVHHYNVLLYLCSSGSGTEGCGIEKGFLIFKQMGVNGVAPNEATFTSAARLAVAKQ
DPEMAFDLVKKMKSFGVPPKLRSYGPALFGFCEKGMADKAYEVDVHMGESGVVAEEAELS
ALLKVSSFSKKADKVYEMMHRLRASVRQVCEETVGVVEDWFNSEYAAEVGLQDWDARKVK
EGVVKGGGGWHGQGWLGKGNWTVVRAEMDSSGVCRSCGEKLVCIDIDPKETENFANSLAE
LASEREVKANFVQFQDWLQKHGPFDAVVDGANVGLITQRNFNFSQLRSVVNKLRQMSESK
KLPLVILHKSRTTGGPAQHPNNKKLLESWKKAGALYATPHGSNDDWYWLYAAVSSKGLLL
TNDEMRDHLFQLLGTSFFPRWKEKHQIRMTASRDDGLKLHMPPPYSIVIQESEQGCWHIP
TLTGDDLEIPRQWVCATRKKALHSVFR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttcgtcgtatgggttatatctcaccttctctttctataaaaacctcacctttc
ttctctattctcacaaaaaacccttttccatttcatcatcttcatcctatccaattcttc
aaaccaattcacaccaaatccccacaaacccatctcttttccatgaaccaaaaaccccat
ttcaccacttccgctgcttttctccaagaacccacaaacacaaaaacattgtctaacagg
tcggccaagaaagctcgccgtgacgcccctgagagtgtgctgcgtcatcagttagaccag
tgttctaaacggggtgatttacaggaagcaattcgactttatgaagaagctaagttaaac
aatattacccttaatgttcatcattataatgtgttgctttatctttgttcttctggttcg
ggtactgagggatgtgggattgagaaaggatttctgatttttaaacagatgggggttaat
ggtgttgctccgaatgaggcgacgtttactagtgctgctagattggcagttgctaagcaa
gacccagaaatggcttttgatttagtgaagaaaatgaagagttttggtgttcctcctaag
ttaagatcatatggcccagcgttgtttgggttttgtgaaaagggaatggctgataaggct
tatgaggttgatgtacatatgggggaatcaggggttgtggctgaggaagcagagctttct
gctctgttgaaagttagttctttttctaaaaaggctgataaagtatatgaaatgatgcat
agattaagggcaagtgtaaggcaggtgtgtgaagagactgttggtgtagtagaggattgg
tttaattctgaatatgctgctgaggttgggctgcaggattgggatgctcggaaagtgaag
gaaggtgttgtgaaaggaggaggtggttggcatggacaagggtggttgggaaaggggaat
tggactgtagtgagggcggagatggatagttccggagtttgccgttcatgtggggaaaag
cttgtgtgcattgacattgatcctaaggagacagagaactttgctaattccttggctgaa
ttggcttctgaaagagaagtcaaggctaattttgtgcaatttcaggactggcttcagaag
catggtccattcgatgccgtggtggatggtgcaaatgtcggccttatcactcaacgaaat
tttaatttctcccagcttaggtctgttgtcaataaattaaggcagatgagtgaatcgaag
aaacttccattggttattttgcacaaaagccgtacaactggtggtcctgctcaacatcct
aataacaagaagctgttagaaagctggaagaaagcaggtgcactttatgccactccacat
ggttcaaatgatgattggtactggttatatgctgctgtcagttccaaaggcttgcttttg
acaaatgatgagatgagagaccatttgttccaactattaggcactagcttttttcccaga
tggaaggaaaaacatcagatccggatgacagcttcaagagatgacggacttaagctccat
atgccaccaccctattcaattgttattcaggagtcagagcagggttgttggcatatacca
actcttactggagatgaccttgagataccaagacagtgggtatgtgctaccaggaaaaaa
gcactgcactctgtctttcgatga
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