Solanum lycopersicum (tomato): 101247688
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Entry
101247688 CDS
T02665
Name
(RefSeq) probable RNA 3'-terminal phosphate cyclase-like protein
KO
K11108
RNA 3'-terminal phosphate cyclase-like protein
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101247688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101247688
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
90S particles
Other 90S particles
101247688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTC
RTC_insert
Motif
Other DBs
NCBI-GeneID:
101247688
NCBI-ProteinID:
XP_004233207
LinkDB
All DBs
Position
2:55468270..55473613
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AA seq
378 aa
AA seq
DB search
MGKVSYMKLKGSQNLRIRLLLATLSSKSIIIEDIRADATWPGLRPHEVSFLRLLEKVCDD
CVVEINETGTKLKYKPGIIMGGRHLVHDCGVSRSISYFLEPLIVLGLFGKKPLTIRLKGI
TNDSKDPSIDTFRSTTLPILKQFGVPAEGLELKIESRGVAPKGGGEVVLSVPMVPNSLKA
VKWVDEGLVKRIRGVSFSTRVSVQFENTMIHAARGILNPLLSDVHIFTDHKAGAQAGMSP
GYGISLVAETTSGCVVSVDTAVSYSRGEDDADLEDDRKDLIPAEEVGEQIASALLGEIKQ
GGVVDSTHQGLLFLLCALCPKDVSEVRVGKLSPYGIEALRHIRDFLGVKFVMKPDASTGT
VNLMCLGSGFQNLSRKVS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagtatcttacatgaagctgaagggtagccaaaacttgagaatacgtctttta
ctggcaaccctttcatccaaatcgattatcattgaggatatacgtgctgatgctacttgg
cctggccttcgtccacatgaggtctctttcctccgcctccttgaaaaagtttgtgatgat
tgtgttgttgaaatcaatgaaactggcacaaaactgaagtacaaacctggaattattatg
ggaggaagacatttagttcatgattgtggtgtcagtcgctccattagctacttcttggaa
ccgttgattgtgctcggtttgtttggaaagaaaccactcaccatcaggcttaaagggatc
acaaatgattcaaaggacccatctattgatacttttcgatcaactactttgcctatattg
aagcaatttggagtccctgcagaaggtttggaactgaaaattgagagtcggggagtcgct
cccaaaggtggtggagaagtagttctttcagtccctatggtcccgaatagtttaaaggct
gttaaatgggttgatgaaggtctggtgaagagaattagaggtgtttccttttcaactagg
gtctctgttcagtttgagaataccatgatacacgcagctcgtggaatcttgaatcctttg
ctttcagatgttcacatctttacagatcataaagctggagcacaagccggaatgtcacct
ggctacggaatttctttagttgcagagactacatctggttgtgtcgtatctgttgatact
gcagtttcttattcaagaggagaagatgatgctgacctagaggatgataggaaagatctg
atccctgctgaggaagttggcgagcaaatagcttctgcactacttggggaaattaaacag
gggggagtcgttgattcaacacatcagggactgctgtttcttctatgtgccttgtgtccg
aaagatgtttcagaagttcgagttgggaagctgtcaccctacggaatagaagcattaagg
cacatcagagattttttgggtgttaagtttgtcatgaaacctgatgcctccacaggaact
gtcaatcttatgtgtcttggctctggatttcagaatttatccagaaaagtatcatga
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