Solanum lycopersicum (tomato): 101247778
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Entry
101247778 CDS
T02665
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101247778
04121 Ubiquitin system [BR:
sly04121
]
101247778
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101247778
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101247778
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101247778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-Nse
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
101247778
NCBI-ProteinID:
XP_004250323
UniProt:
A0A3Q7JJV2
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All DBs
Position
11:6449585..6450859
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AA seq
333 aa
AA seq
DB search
MSSIENPNSGNRTFHRYWCYQCHLIVRVSPENPSEIICPRCFGHFLCEINETNPGQILDF
TAFDPSPEARILEALTLMLDPNLFNTSQANVVPIFRRSDGTETLVPPPTRGRERIRDFWL
RPRRIYSFLNDTDEFTPESGILARPRSWIVIRPSLGGPGPDRRERRRLGPPDVNNNRDYF
TGPDLENLIEELTQNDRPGPAPAPEPIIHSIPTVVIAAAHLKDDSECPVCKEKFKIGGEA
RELPCKHIYHSDCIVPWLRLHNSCPVCRNPVPVTSEAQVDSSDDCVEEEVRMNRQRRCFR
LRQMAASLWPFRSRYRAMRNHDEPSVQSSCNIL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaattgaaaaccctaacagtggtaacagaaccttccatcgttactggtgttat
caatgccatcttatcgtcagagtatcgccggaaaatccctcggagatcatctgtcctcgt
tgtttcggtcacttcctctgcgaaatcaatgaaacgaaccctggacaaatcttagacttc
actgcatttgatccttctccagaagctagaattctcgaagctctgactctaatgctcgat
cctaatttattcaacacctctcaagccaatgtggtccctattttccgtcgttcagacgga
actgaaactctcgtgccaccacctactcgtggacgagagagaattcgagacttctggtta
agaccgagaaggatatactcatttctaaatgacacggatgaatttacaccagagagcgga
atcctagcacgtccgcgctcatggattgtcatccgaccatcattgggtggacctggacct
gaccgtagagaaagacgacggttaggtccacccgatgtaaataacaatagagattatttc
acaggtcctgatcttgaaaatctaatagaagagttaacacaaaatgatcggccgggtcct
gcaccagcaccggagccgatcattcattcgattccgaccgttgtaattgctgccgcacat
ttaaaagatgattcagaatgtccggtgtgtaaagaaaaatttaaaataggcggagaagca
agagagttaccatgtaaacatatatatcattccgattgtattgttccttggttaaggtta
cataattcctgcccggtttgtcggaatccggtgccggttacttcagaagctcaggtggat
agttctgatgattgtgttgaagaagaagtaaggatgaacagacaacgacgttgcttcaga
cttagacaaatggcagcttctctatggccatttaggtcgaggtatcgtgctatgcgtaat
catgatgaaccatcggtgcagtcgtcatgtaatattctttag
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