Solanum lycopersicum (tomato): 101247968
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Entry
101247968 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101247968
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101247968
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_EIPR1
EIF3I
WD40_MABP1-WDR62_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
WD40_like
Motif
Other DBs
NCBI-GeneID:
101247968
NCBI-ProteinID:
XP_004231066
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Position
1:complement(94114017..94121223)
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AA seq
549 aa
AA seq
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MMRKTTRSSIDCAVVDVWKRAVGELSTRNFAHRLGASEDLVLRLDVFRKLEKHRGCVNTV
SFNPDGDIVISGSDDRRIILWDWETGKIALSFHSGHHNNVFQAKIMPYTDDRSIVTCAAD
GQVRQAQILEHGKVETKLLAKHQGRAHKLAIEPASPHIVYTCGEDGLVQHIDLRTDTATE
LFTCQPLRMRRYMSVLHLNAITIDPRKPYLFAVAGSDEFARIFDIRKYKWDGSTDFGHPV
DYFCPPHLVGDENVGITGLAFSDQSELLVSYNEEFIYLFTKDMGLGPDPSPTSPLYNESD
EGEMGQDHESDESAIVMEYGANIGPQVYKGHRNSETVKGVNFFGPKCEYVVSGSDCGRIF
IWKKRGGDLVRVMEADKHIVNCIESHPHTAMLASSGIENDIKIWTPKATERAILPTNIQK
GSTPHPFHLFDYGGAEDNGIYFFDTGSDDEYGGSSDNEDEDDSDMDEDEDVFSDGMDDDD
DDNSDDDDDDNDDDDDSFDFLDIPDDGNGVEFFETVGDPDFDDSSDNDQDAPSDSCCDDD
DSNENDIDE
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggaaaacaaccagaagtagcatcgattgtgcagttgttgatgtttggaaacgg
gcagtgggtgaactctctaccagaaatttcgcccaccgtctcggtgcctcagaggatctt
gtgctccggcttgatgtcttccggaagctggagaagcaccggggctgtgtgaatacggtt
agcttcaaccctgatggtgatatagtcatatcaggttctgatgaccgaaggatcatactc
tgggactgggaaactgggaaaattgcactttcattccattcaggtcatcataacaatgtc
tttcaagcaaaaatcatgccatacactgatgatcgaagcattgttacctgtgctgcagat
ggacaggtgagacaagcacagattctagaacatgggaaggtggaaacaaagttgctagcc
aaacatcaagggcgagctcacaaattggcaattgaacctgcaagcccccatattgtttac
acttgtggagaagatggattagttcaacatatagatttgagaacagacactgctacagag
ctttttacttgccaacccctgcggatgaggagatatatgtctgtacttcatctaaatgcg
attacgatagatccaagaaaaccctatttgtttgctgttgctggatcagatgaatttgcc
agaattttcgacattcgcaaatataagtgggatggatccactgattttggccatccagtt
gactatttctgtcccccacatcttgttggtgatgagaatgtggggataacaggtttggct
ttctctgaccagagtgagcttcttgtttcatataatgaagagtttatttatcttttcaca
aaggacatgggcctgggacctgatccatcccctacatcgccattgtacaatgaaagtgat
gagggcgaaatgggccaagatcacgaatctgatgaatctgcaattgtcatggagtatgga
gcaaacattggtccacaagtctacaaggggcacagaaactctgaaacagttaagggcgtg
aacttttttgggcccaagtgtgaatatgttgtgagtggatcagattgtggtagaattttc
atatggaagaaaaggggtggggatcttgttcgtgttatggaagcagataagcatatagtg
aactgcattgagtcccatcctcataccgcgatgcttgccagcagtggaattgagaatgac
ataaaaatatggactccaaaagccactgaaagagctattttacctacaaatattcaaaag
ggttcaacacctcatccatttcatttattcgattatggcggtgcggaagataatggcatc
tacttctttgataccggaagtgacgatgagtatggtggtagtagtgacaatgaggatgaa
gatgatagtgatatggatgaagatgaagatgttttctccgatggtatggatgatgacgat
gatgacaatagtgacgatgatgacgacgacaacgatgatgatgatgatagttttgatttt
ttagatatacccgatgatggaaatggtgttgagttctttgaaactgttggggaccctgat
tttgacgattcctcagataatgaccaagatgctcccagtgattcatgttgtgatgatgat
gactccaatgaaaatgacattgatgagtga
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