Solanum lycopersicum (tomato): 101248049
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Entry
101248049 CDS
T02665
Symbol
AGO4D
Name
(RefSeq) Argonaute 4D
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101248049 (AGO4D)
03036 Chromosome and associated proteins [BR:
sly03036
]
101248049 (AGO4D)
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101248049 (AGO4D)
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101248049 (AGO4D)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
101248049 (AGO4D)
microRNA pathway
RISC loading complex
101248049 (AGO4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF7780
Motif
Other DBs
NCBI-GeneID:
101248049
NCBI-ProteinID:
NP_001266010
UniProt:
K4B063
LinkDB
All DBs
Position
1:83630553..83637649
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AA seq
881 aa
AA seq
DB search
MASSKDEATATKLDRHPMARQGTGSKGQKIRLLTNHFKVGMNNTDGHFFHYSVAINYEDG
NPVEVKGVGRKILDKVHQTYSMELAGKDFAYDGEKSLFTIGALPGNKLEFDVVLEDVSSS
RTDRGSPDGSPSDVDRKRSKKQPWSKAYKVVIKYAAKIPMQAIANALRGQDSEQYQEAVR
VLDIILRQHAAKRGCLIVRQSFFHNEPRNFVDLGGGVSGCRGFHASFRATQGGLSLNMDV
STTMIVKPGAVIDFLLANQNAKEPYQIDWSKAKRMLKSLRIKTSPSNREYKITGLSDKPC
NEQTFTLKQKNGDGGVQEVETTVYDYFTYHRRIPLQYSGELPCINVGKPKHPTFIPLELC
TLVSLQRYTKALSNLQRASLVEKSRQKPQERMRALTDALKTSNYKADPLLGSAGISISDQ
FTQVDGRILPTPKLRVGDDQDLFPRNGRWNFNQKRLVEPVKLERWAAVNFSARCDVRKLC
MDLQRCGKMKGIFISPPFQHIFEENQQYRRNPAPVRVEKMLEELKSKLPAPPQFLLCILP
ERKNSDLYGPWKKRNLADLGIVTQCIAPTKINDQYLTNVLLKINAKLGGMNSFLTTELSP
TLPQISKVPTIIIGMDVSHGSPGRADAPSIAAVVSSRQWPFISRYRAAVCTQSPKLEMID
SLYKKVSDTVDEGLFRELLRDFYVSSKNVKPEHIIIFRDGVSESQFNQVINIELNQIIEA
CNHLEETWSPKFTVIVAQKNHHTRFFQTNSPDNVPPGTVIDNAVCHPKTNDFYMCAHAGP
IGTTRPTHYHILHDEIGFSADDMQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVAQF
IKFDEISEATSSHGGVSTAGSVLVPQLPRLHKNVRSSMFFC
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcaaaagatgaagctacagcaacaaaattagaccgtcatcctatggctcga
caaggaactgggtccaagggacagaagattcgcctgctcaccaaccatttcaaagtaggg
atgaacaacactgatgggcacttcttccactatagcgttgctataaactatgaagatgga
aaccccgtagaggtgaaaggagttggaagaaaaatccttgacaaggtccaccaaacatat
tcaatggagctagctggcaaagactttgcttatgatggggagaagagcttgttcactatt
ggtgcactgcctgggaacaagttagagtttgatgttgtcctggaggacgtctcgtcatct
agaactgatcgaggcagccctgatgggagcccaagtgatgttgataggaaaagatcaaag
aagcagccatggtcaaaggcatacaaagtggtaattaagtatgctgcaaaaataccaatg
caagccattgcaaatgcactccggggacaagattctgagcagtatcaagaggcagtgaga
gtgcttgatataattctgaggcaacatgctgccaaacggggctgccttattgtgcgccag
tctttttttcacaatgagcctcgaaactttgttgatcttggtggaggagtttcaggatgc
cgaggtttccatgcaagcttccgggccacgcagggaggcctttcattgaacatggatgtg
tcaaccacaatgattgtgaagccaggagcagtgattgatttccttcttgccaatcaaaat
gcaaaagaaccttaccagattgattggtccaaggcaaagaggatgctgaagagtctgagg
atcaagaccagcccttcaaatagggaatacaaaatcaccggcctcagtgataagccttgc
aatgagcagactttcacgttaaagcagaaaaatggggatgggggagtgcaagaggttgag
acgaccgtgtatgattatttcacttatcatcgccgtattcctttacaatattctggagaa
ctcccctgcattaacgttgggaaaccaaagcacccaacttttattcctcttgagctatgc
actctggtgtctctgcaacgctacaccaaggccctgtccaatctacaaagagcttccctt
gtagaaaaatcccgacaaaagccccaagagaggatgagagctttgaccgatgccctaaag
accagcaactataaggctgatcctcttcttggatctgctggaatttcgatcagtgatcag
tttacacaagttgatggtcgtatcttgccaactccaaagttgagggtgggggatgatcaa
gacttgtttcctagaaatggaagatggaattttaaccagaagcgattggttgaaccagtc
aaacttgagcgttgggcagctgtgaacttttctgcccgttgtgatgttcgtaagctttgt
atggatctacaaaggtgtgggaaaatgaaaggaattttcatcagtccaccatttcagcat
atctttgaggagaatcagcagtacaggcgaaatcctgctcctgtgagagttgagaaaatg
ctagaagaattaaaatcaaaacttccagctccacctcagttccttctatgcattcttcca
gagagaaagaactctgacctctatggcccctggaagaaaaggaatttagctgatcttgga
attgttacacaatgcattgctccaacaaagatcaatgatcagtaccttaccaatgtgctc
ttgaaaatcaatgcaaagctgggtggcatgaattcctttttgactacagagctttcccct
acactacctcagatttccaaagtccccactattattattgggatggatgtctctcatggc
tcacctggacgagcagatgctccatccattgcagcggtggtcagctctagacaatggccc
tttatttcacgctatcgagcagctgtttgtacacagtcacccaagctggaaatgatagat
tctctgtacaagaaagtatcagataccgtagatgagggccttttcagggagctgctcagg
gacttctacgttagttctaaaaatgtgaaacctgagcatatcatcatcttcagagatgga
gtaagtgagtcccagttcaaccaagtcataaacattgagctcaatcagattatcgaggcc
tgtaatcatctggaagaaacttggtctccaaagttcactgtcattgttgcacaaaagaac
caccacacaagatttttccagaccaactcaccggataatgttcctcctgggactgtgatt
gacaatgcagtttgccatccaaagaccaatgacttctacatgtgtgctcatgctggacct
attggaacaacaagacctacacactaccatattctgcatgatgaaattggattctcagca
gatgacatgcaagagctggtccattcattgtcttatgtgtatcagagaagtaccacagcc
atctctgttgttgcacctatatgttatgcccacttggcagcagcacaggtggcacagttt
atcaagtttgatgaaatttctgaggccacctcgagccatggtggagtttcaacagctggt
agtgtgctagtccctcaattgcctcggcttcacaagaatgttcgcagttcaatgttcttc
tgctaa
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