Solanum lycopersicum (tomato): 101248103
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Entry
101248103 CDS
T02665
Name
(RefSeq) mRNA export factor GLE1 isoform X2
KO
K18723
nucleoporin GLE1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101248103
03015 mRNA surveillance pathway
101248103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101248103
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101248103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
101248103
NCBI-ProteinID:
XP_004239149
UniProt:
A0A3Q7GGF6
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All DBs
Position
5:complement(7533141..7543401)
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AA seq
658 aa
AA seq
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MGAVKLQLPLPKSVDGVTLDPNPDWTFDALLVELNSIEKKLNPSSKFPIPFTKTESRQLS
ASKDNSRRGFVMQVSDDDVEDMDRDTKHEVGDHLLMGGKRFACHEIYLSDSDQSEEGLNI
ELQDDLMDKVGLVESALSELAHDHQLTIAEEMRDQLSVLEAELTDESEKLASILERVERN
TEAQREMNRKFDMQYQRKIAEALDDHLTTVQRDHEHRSQIEERRIRDDAAREEAKRKEKA
LHEEKARQERIRTETKVQARLEAERVEKEKAAALEAERVEKEKAAALEAERKAAKEAAAA
SDKKSSESVMTASPEASKVSRDVTSQPARPISDGQKHSTGNTIRVTENAQKLEEKRLSVY
NEIAAQNDALGLGSNKAYRKFEMEIARRIRTITGSKENVRVKADELIKLISGSTCPQSIS
IAMFAQKVVSLCVKPTGSFNSAVYAYGRVIVHVTSKVPLAMEILIAELNKVCIYTVPKYI
MYSEAAFQTKEAYYKAIGYAEEDGKIESTDSYVDRLSACMKLYGALVQTEVDGCQNLHGI
REGWAWIARFLNVFPANLYTAAALQAFLEMAGFALHKRYKTQFRKLLDIITRDFLTALKD
RGDAKLVKVIVSLRSYIESNQFLNEPEGWRLRSSLESHNFAPDSDHDQQYHYQQNRFY
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgttaaactgcaactcccgttgcctaaaagtgttgatggagtcaccctggat
ccaaatcctgattggacctttgatgctttattggttgagctcaattcgattgagaagaag
ctcaatccatcatcaaaatttccaataccttttacgaaaacagaatctcgacaactctcg
gcttcgaaggataattctcggagaggctttgttatgcaagtgtctgatgacgacgtggag
gatatggacagagatactaagcatgaagttggtgatcatttacttatgggaggaaaacgg
tttgcctgtcacgaaatctatctgagtgatagcgaccaatctgaagaaggcctaaacatc
gaacttcaagatgatctaatggataaagtgggattagtggaaagtgctttatctgagtta
gctcatgaccatcagcttactattgcggaggaaatgagagatcaactatcagtacttgaa
gccgagttgacggatgaaagtgagaagcttgcctccatactagaacgagttgagagaaac
actgaagctcaaagggaaatgaacagaaaattcgacatgcagtaccaacgtaaaattgca
gaagcccttgatgatcacctaactacggtacaaagggatcacgaacacagatcccaaatt
gaagaaaggagaataagagatgatgcagctcgtgaagaggccaagaggaaagaaaaagct
cttcatgaagaaaaagcccggcaagaaaggatcagaacagaaaccaaggtgcaagctagg
ctggaagctgaaagagttgaaaaggaaaaagctgctgcgctggaagctgaaagagttgaa
aaggaaaaagctgctgcgctggaagctgagagaaaagcagcaaaagaagctgcagctgcg
tcagataagaagtcatctgagtcagtgatgactgcttctccagaggctagcaaggtttca
agggatgtcactagtcagcctgcgagacccatatctgatgggcagaaacattcaacagga
aatacaatcagggtgacagaaaatgctcaaaaactggaggagaaaagattgtccgtttac
aatgaaatagctgcgcagaatgacgcactgggattgggttcaaacaaggcttaccgaaag
tttgaaatggaaatagccagacgaatcagaactatcactggttcaaaagaaaatgtcaga
gtgaaagcagatgaattaattaagctaattagtggttcaacatgtccacaatccatcagc
attgcaatgttcgcacagaaggtggtgtccctgtgtgtgaagcctacaggaagctttaac
agtgcagtctatgcttatggtcgtgtaattgtccatgttacatcaaaggtccctcttgcc
atggaaattctcatagctgagttgaacaaagtttgcatttacacagttcctaagtacatt
atgtactcagaggcagccttccagactaaagaagcttactacaaagctattggctatgca
gaggaagatgggaagatagaaagtactgatagttatgtggatcgcttaagtgcatgcatg
aaattatatggtgcacttgttcagactgaagttgacggctgccaaaacttgcatgggatc
agagaaggttgggcatggatagccagattcttaaatgtttttcctgcaaatttatacacc
gcagctgcattgcaggcttttcttgaaatggcaggttttgctctacacaaaagatataag
acacaattcagaaagctgctggatattattactagagattttctaactgcattgaaagat
cgaggtgatgcaaagttggtcaaagtgattgtgagtctccggagttatatagagtcaaat
cagttcctgaatgaacctgagggctggcgcctcaggagttccttggaatcacacaatttc
gctccagattcagatcatgatcaacagtatcattaccaacagaatagattctattag
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