Solanum lycopersicum (tomato): 101248146
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Entry
101248146 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K13114
pinin
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101248146
03015 mRNA surveillance pathway
101248146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101248146
03041 Spliceosome [BR:
sly03041
]
101248146
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101248146
Spliceosome [BR:
sly03041
]
Complex C
Other components
EJC/TREX
101248146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
101248146
NCBI-ProteinID:
XP_019067373
UniProt:
A0A3Q7ES18
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Position
1:89047680..89052110
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AA seq
414 aa
AA seq
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MASGVVEKTEEELRKELFELNRQQREITERLKDPRGLRRGGGGPRSFVANGGRQRGVVRP
AERNDAEDQPAPKRRMSSTVVKIEEGEIAEDVSGAPRDANKEESIVEAIPRVAPANQNER
KPSNWLRRDGFQRPSKMDFDIPPPEPVPRVLPKNEDPKLVGRNKRMLGQLLGTLEKFRKE
DMQLSGTEAYMRRSDSLKRAEQRAREESEKLRQQEREQLDEKLKRDLTLRARLAAKAEEK
RLELLFLRWIEHHKKLANFIRTKAEPPIFYSFAKPLEEDSTLLEQRKDQIFEEWKAARRE
ELSQYQKKIAEQNIAKAEEEWKNILERRANKNVSNLQETMDKELETHRLERGPKTRKIPG
VSNNEDEDVEDINVVEDDMMDDVLEVDENNQRSDENVKVDAGNGDPRIDNNDEQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcgtagtggagaagacggaggaagagctccgcaaagagctctttgaactc
aataggcaacaacgcgagattactgagcggcttaaggatccaagaggtcttcgacgcggt
ggcggaggtccacggagttttgttgccaatggtggccgccaacgcggcgttgttagacct
gccgagaggaatgatgcagaggatcagccagcacctaaaaggcgtatgtcttctactgtt
gtgaagattgaagagggggagattgctgaggatgtatccggagctccaagggatgcaaat
aaggaagagtcaattgtggaggcaatccccagggtggcacctgccaaccagaatgaaagg
aagccatccaattggctacgaagagatggctttcaaaggccatccaaaatggattttgat
atacctccaccagagcctgtgccaagagtcttgcccaaaaacgaggatcctaaattggtt
ggtaggaataagagaatgttggggcagctgctggggaccttggagaaattccggaaagaa
gacatgcagctttcagggacagaggcttacatgcggaggtcagattctttgaaaagggct
gagcaaagggcgcgcgaagaaagtgagaagttaagacaacaagagcgggagcagcttgat
gaaaagctgaaaagagatctgactcttcgagcacgtcttgctgctaaagctgaggagaag
aggctggaattgctgtttcttcggtggattgagcaccacaaaaaactagccaattttata
aggaccaaagccgagcccccgatcttttattcttttgccaaaccattggaagaagattca
accttacttgagcagagaaaagatcagatattcgaggaatggaaagctgcaaggagagag
gaattgtcgcaataccagaaaaaaattgctgaacagaatattgcaaaagctgaggaggaa
tggaaaaatattttagaaaggagagccaacaaaaatgtttcaaaccttcaagagactatg
gacaaagagctagagactcataggcttgagcgtggacccaagactcgaaagattcctggt
gtcagcaacaatgaagatgaggatgttgaggatatcaatgttgtggaggatgatatgatg
gatgatgtgctagaagtggatgagaataaccagaggagtgatgaaaatgtgaaagttgat
gcaggcaatggtgatccacggattgataacaatgatgagcagtag
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