Solanum lycopersicum (tomato): 101248184
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Entry
101248184 CDS
T02665
Name
(RefSeq) chaperone protein ClpD, chloroplastic isoform X1
Organism
sly
Solanum lycopersicum (tomato)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
nSTAND3
Sigma54_activat
AAA_7
AAA_14
IstB_IS21
NACHT
RsgA_GTPase
AAA_25
Zeta_toxin
AAA_18
RNA_helicase
NBD_SMAX1
Torsin
DNA_pol3_delta2
AAA_33
Motif
Other DBs
NCBI-GeneID:
101248184
NCBI-ProteinID:
XP_004235865
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All DBs
Position
3:complement(63782682..63789475)
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AA seq
965 aa
AA seq
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MELSCSSPLSVNSTISFNRYVSVYPHRRCQSVLSLFPYYPSSSSHVATTATASAPCSTSS
SSSTLFGISFSHRPSSSVHRKIKRSMYIVSGVFERFTERSIKAVMFSQKEAKALGKDMVS
TQHLLLGLIAEDRSPGGFLGSRITIDKAREAVRSIWLGDSEDDTTKLGSQDSGSATSATD
VAFSSSTKRVFEAAVEYSRTMGYNYIAPEHIAIGLFTVDDGSAGRVLKRLGANVNRLAAE
AVSRLQGELAKDGRDPISFKRSREKSFPGKITIDRSAEKAKAEKNALEQFCVDLTARASE
GLIDPVIGRETEVQRMIEILCRRTKNNPILLGQAGVGKTAIAEGLAINIAEGNIPAFLMK
KRVMSLDIGLLISGAKERGELEARVTTLIKEVKESGHIILFIDEVHTLVGAGTVGRGNKG
SGLDIANLLKPTLGRGELQCIASTTMDEFRLHIEKDKAFARRFQPILVNEPSQADAVQIL
LGLREKYESHHKCRYSLEAINAAVELSSRYIPDRYLPDKAIDLIDEAGSKSRMQAHKRRK
EQQISVLSQSPSDYWQEIRAVQTMHEVILASKLTENADASRLDDDSELHLQPASSSTSDQ
HELPLVGPEDIAAVASLWTGIPLKQLTVDERMLLVGLDEQLKKRVVGQDEAVTSICRAVK
RSRTGLKHPNRPISAMLFCGPTGVGKSELAKALAASYFGSESAMLRLDMSEYMERHTVSK
LIGSPPGYVGYGEGGTLTEAIRRKPFTVVLLDEIEKAHPDIFNILLQLFEDGHLTDSQGR
RVSFKNALIVMTSNVGSTAIVKGRQNTIGFLLAEDESAASYAGMKAIVMEELKTYFRPEL
LNRIDEVVVFRPLEKPQMLEILNLMLQEVRARLVSLGISLEVSEAVMDLICQQGFDRNYG
ARPLRRAVTQMVEDLLCESVLSGDFKPGDVAVIHLDESGNPVVVNQSSQSIQLSDTNGNP
VVTNR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggagttatcgtgttcttctccgctttctgtcaactctactatcagtttcaatcgatat
gtttctgtgtaccctcataggagatgtcaaagtgttctctccctttttccatattatcct
tcttcttcttctcatgttgctaccacagctactgcttctgctccttgtagtactagcagt
tctagttcgaccctttttgggatttccttttctcatcgacccagcagttccgttcatcgt
aaaatcaagcgttctatgtatattgtgtcgggggtgttcgagagatttactgagagatcg
attaaagctgtgatgttctcccagaaggaagcaaaggctttgggtaaagatatggtgagc
acccaacaccttttacttggtcttatcgcggaggatcggagtcctggtgggtttcttggt
tctcgaataactattgataaggcccgtgaagctgttcgtagcatatggcttggtgactca
gaggacgatacaacaaaattgggttctcaggactccggttcagctacctcagctactgat
gtggccttttcttcaagtaccaagcgggtttttgaggctgcggttgagtattcaaggacc
atggggtataattatattgctcctgagcatattgctattggtttgtttactgttgatgat
ggcagcgctggtcgtgtgctcaagaggttaggagcaaatgtaaatcgtctggcagctgag
gcagtttccaggcttcaaggagagcttgctaaagatggtagagacccaatttcgttcaaa
agatcacgtgagaaatcctttcctggaaaaataactattgacagatctgctgagaaagca
aaagcagagaaaaacgctctggagcaattttgtgtagatcttactgcccgtgcaagtgag
ggccttatagacccagtaattggtagggagactgaagttcagagaatgatcgagatactc
tgccgtcgaaccaaaaacaatcctattctgcttggtcaagctggagttgggaaaacagcg
atagctgaagggcttgctataaacattgctgaaggaaatattcctgcgttcttaatgaaa
aaacgggtaatgtctttagacattggcctattgatttcaggtgcaaaggagaggggtgaa
ctagaggcgcgtgtgactacattaattaaggaggtaaaagagtcaggccatatcattcta
ttcatagatgaggtccacacccttgttggtgctggcacagttggacggggaaataagggc
tctggtcttgacattgctaatttgctaaaaccaacacttggccgtggtgaactgcagtgt
attgcatctaccaccatggatgagttcagattgcatattgagaaagacaaggcctttgct
cgaaggttccagcccatcttggttaatgaaccaagtcaggcggatgctgtccagatacta
ttggggttgcgtgaaaaatatgagtcgcatcataagtgtaggtacagtctggaagccatc
aatgctgctgtggaactatcatcaagatatataccggataggtatcttcctgacaaagct
attgatcttattgatgaggctggtagtaaatctcgtatgcaagctcacaaaagaagaaag
gaacagcagatatctgtactttcacaatcacctagtgattattggcaggaaattagagct
gttcaaaccatgcatgaagtgatcctggctagcaagctgactgaaaatgctgatgcgtct
cgtttggatgatgacagtgaacttcatttgcagccagcttcgtcttctacatctgatcaa
catgaactcccattagttggacctgaggatatagcagcagttgcttcactctggacaggc
attccccttaagcagcttacagttgatgaaagaatgcttttggttggtcttgatgagcag
cttaagaaaagggttgttggtcaggatgaggctgttacatctatttgtcgggctgttaag
agatccagaactggcctcaagcacccaaatagaccaatttcggcaatgctcttctgtggt
cctactggagttggaaaatctgaactggctaaagctttggcagcatcttattttggatct
gaatctgccatgctaagattggatatgagtgaatacatggagcggcatactgtgagcaag
ttaattggatcgcctcctggttatgtaggctatggagaaggagggactctaactgaagct
atccgaagaaagcccttcactgtagtgctgctagatgagattgaaaaggctcatcccgac
atattcaatattctccttcagttgtttgaagatggtcacctaacagactctcagggaaga
agagtgtcatttaagaacgccttgatagttatgacttcaaatgtgggttcaacagccatt
gtaaagggtagacagaatactatcggcttcttgcttgctgaagatgagtcagccgcctcc
tatgctggtatgaaagcaatagtgatggaggagctcaaaacatactttcgtccagagtta
ctgaataggatagatgaagtagtggtattccgtccactagagaagcctcagatgctcgag
atattaaacctgatgttgcaggaggtaagagctaggcttgtttcattaggaataagtttg
gaggtatcagaagcagtaatggacctcatatgccaacaaggatttgacagaaactatggc
gcacgccctctgaggagggctgttactcaaatggttgaagatctcctgtgtgaatctgta
ctttctggggatttcaagcctggtgatgttgctgtgatccatttagatgaatctggaaat
cctgtcgtcgttaaccagtcaagccagagtatccaattgtctgatacaaacggaaatcca
gtagtcaccaacaggtga
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