Solanum lycopersicum (tomato): 101248198
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Entry
101248198 CDS
T02665
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101248198
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101248198
Surveillance factors
Other surveillance factors
101248198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
101248198
NCBI-ProteinID:
XP_010321019
LinkDB
All DBs
Position
5:complement(13434390..13443115)
Genome browser
AA seq
1559 aa
AA seq
DB search
MAEGNLDLPDDLLSSKTSDHSKGNDDNKPFMGQLDISKDQPMVDSSIPLSPQWLYVKPSD
TKMEPRPPSSLSLGSSVDSSQKDAWRTDVPEDKKDWRRKTMETESSRRWREEERETGLLG
RRERRKTDRRAEHDVNNRNSGVDTRRDNKWSSRWGPDDKEKENRTEKRIDVDKEDVHNDG
QTFVANRTVSERESDSRDKWRPRYKMEGNSAAPSSYRAAPGFGQERGKVEGSNVGFNLGR
GRSTGTIRRPSSGGAIGASPFENSVPGKSGISTGIFSYPRGKALDIYRRQKLGSSLCSMP
ENMEEAPPVTQVIAIEPLAFVVPDAEEEAVLNDIWKGKITGGGVSNNSFRKGQSMDNVTE
TGDTEPNNTKIGAPSADVTEETVDGLLKTSIRVEEANTYSFVYENGVRVKFDGGDSHEGQ
KDNHSEAIAADGSLLTRKRADNSDCFKYISGSQFDISMQRLPDSGATKTPIFENNQHVAF
DGSLKVSDDSNSAFVKSSSEIYWNNLLGRGIPPEELSLYYRDPQGEIQGPFLGADIISWY
DQGFFGMDLLVRLEDAPEDSPFFELGDVMPHLKFEHEHFGNTNLSQAEPSAVLEGKLDSG
LRSSASVSEMVGSAAFDGSCWQPSDFDGLGGHHIQSVPDHPARQFKPPYSQNEECNDFGA
QDEEIVFPGRPGSSGSPIGKTSTGLTDPSNIHRATPSAICDGGVSNHEETLHPLGLLWSE
LEGTTGKSGPISDVPFRGTGQDQVLNPGAGRVGPFGAKMDSTSAAETWTDAYRRNAGSEP
NLYQDAMDASRLLHQDHEMSRFELAEKMFSQQLQQQHPHNLMSHHNSNLNEALMERGANH
NLMHQPQLASQAGQDLEHFMVLQLQQQRQLQLQQLQQQQQQQQQQQFHQQQMLMKEQQSH
VRQLALEQLLQSQVRDQSHTQSRLDAIRHNSAQEQVLIKQQILSDLQQRPRLPPRHAESS
IEHLIQAKFGQMPHQGPQNDLLELLSRAKHGQLHPLEQQVRQQEQAHERLRQRLEMEEDR
QIGAVWPVDETAQYLRNPGVARRANSGFGPLDIYQQQQIPPPEEHVSVLERNLSMQDRLQ
RGLYDTGFMPLERTMSVPGGGPGVNLDAVNPLVHAPGLEMQDPNSRMHSAGHMPAFSTGI
HLQSSHRPPFQFHAPNVDTIENYWPERNGQLPADWMDTRMQQLHLKGERQRRDFDVKRAS
EDQSMWMSAGANDDSSKRLLMELLQQKSGQQSTEQAEMTRGILFERGLHSGHFSVTNASN
RSFNPLLDQDTSLNQAFTVGSYGSNSDLPPQRDHVNEIADSLDACERLPFKSHSGALAEA
QPVFSSINDASKVHLEARESIVRQAGLTTVEGEMPTNLLSRHTALGTGDCSVFKSSSRGS
LDFYNDKSDRGDSAIEEIPKERMAVTSIRTDNILPKRPPVSRISSTQEGLSEINSDSLAR
GKNPSDGMASEGGRKEAGGNAANQVLGSATSVNKDGRFRRTASCSDADVSETSFSDMLKS
NVKKATAQEAHASEAMDATQYARSGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIED
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggaaatcttgatcttcctgacgatcttctttcctctaagacttctgatcac
tccaaaggtaatgatgacaacaagcctttcatgggccagcttgatatttccaaagatcaa
ccaatggtggacagcagcattcctttgtctccgcagtggctttatgttaaaccaagcgac
acaaagatggaaccacgtccaccaagctctctgtcacttggaagttctgttgattcaagt
cagaaggacgcttggcgtacagatgtacctgaggacaagaaggattggagaagaaagaca
atggaaactgagagcagtcgccggtggcgtgaggaagagagggaaactggcttgcttggt
cggagagaacgaaggaaaaccgatcgccgtgctgagcatgatgttaataaccgtaattct
ggggttgatacaaggcgtgataacaagtggtcttctaggtggggtcctgatgacaaggaa
aaagaaaatcgcactgagaaaaggatagatgtagataaggaagatgttcataatgatggc
caaacatttgtggccaaccgtactgtctcagaacgggagtcagattctcgtgacaagtgg
cgtccacgctataaaatggagggcaactctgcagctccaagttcctatcgagctgctcca
ggttttggacaggagagaggaaaagtagaagggtcaaatgtgggatttaacttgggtcgt
gggaggtctactgggactattagaagaccttcctctgggggtgcaattggtgcttcacca
tttgaaaattctgttcctggaaaatcaggaatctcgactggcatattcagttatccaagg
gggaaagctcttgacatataccgcaggcaaaagcttggctcatctctttgtagcatgcct
gaaaatatggaagaagctcccccagttactcaagtaattgctattgaaccattagctttt
gttgttcctgatgctgaggaggaggctgttctcaatgatatatggaagggtaaaattact
ggtggtggtgtttctaacaattcctttagaaagggtcaatcaatggataatgtcacagaa
acaggggatacagagcccaacaatacaaaaataggtgctccctccgctgatgtcactgaa
gagacagttgatgggttgctgaaaacatcaatacgtgttgaagaagccaatacctatagc
tttgtttacgagaacggtgtcagggtcaagtttgatggaggagatagtcatgaaggacag
aaagacaatcattctgaagctatcgccgcagatggaagtttgttgaccaggaagagagct
gataatagtgactgcttcaaatacattagtgggtcccaatttgatatttctatgcagagg
ttaccagattctggagcaaccaagacacctatctttgagaacaatcaacatgttgctttt
gatggcagtttaaaggtgtctgatgattcaaattctgcatttgtgaagtcctcttctgaa
atctattggaacaaccttctaggaaggggtattccaccagaggagttgagtttgtactat
cgtgatcctcagggcgaaatccaggggccatttctcggagctgacatcatatcatggtat
gatcagggattttttggtatggacttactagttcgcttggaagatgcccctgaagattca
cctttctttgaacttggtgatgtaatgccgcatttgaaatttgaacatgaacattttggt
aacaccaatctttcccaggcagaaccatctgctgtactagagggtaagttggattctggt
ttacgtagctcagcttctgtttctgagatggttggttctgctgcctttgatggctcctgc
tggcagccatctgattttgatggccttggtgggcatcatattcagtcagtacctgatcat
ccagctcgtcaatttaaacctccatattcacaaaatgaagagtgtaatgattttggtgct
caagatgaagaaattgtgtttccaggaagacctggaagcagcggtagtcctattggaaaa
acttctactggtcttactgatccttcaaatatccaccgtgcaactccaagcgcgatatgt
gatggtggagtttcaaatcatgaagagacattgcatccacttggtttattatggtcagag
cttgaaggcactaccggaaagagtggtcctatctcagatgttccttttagaggaactggc
caggatcaagttctaaaccctggtgctggaagggttgggccatttggtgccaagatggac
tcaacctctgctgcggagacatggactgatgcttatagaagaaatgctggatcggaaccc
aacttatatcaagatgctatggatgccagccgcttattgcaccaggaccatgaaatgagc
cggtttgagttagcagagaagatgttttcccaacaacttcagcagcagcatcctcataat
ttgatgtcccatcataatagtaacttaaatgaagctttgatggaacgtggagcaaatcat
aatttaatgcaccaaccacagttggcgagtcaggctgggcaggatctagaacactttatg
gtgcttcagctgcaacagcagagacagttacagcttcaacagctgcagcaacagcaacag
caacagcaacagcaacagttccatcaacagcaaatgcttatgaaagaacaacagtcccat
gttaggcagctggctcttgaacaattattgcagagtcaagtacgggatcaaagtcacaca
caatcacgtcttgatgctattaggcataatagtgctcaggaacaggtgttgataaagcaa
caaattcttagtgatctgcaacagcgtccacgtcttcctccaagacatgctgaatcatct
attgagcatctcattcaagcaaagtttggtcaaatgccacatcaagggcctcaaaatgat
ttattggagctcttatcacgggcaaaacatggacagttgcaccctttagagcaacaagtc
cgtcaacaagaacaagctcatgagaggttaagacaacgtttggaaatggaggaagataga
cagatcggtgctgtatggcctgttgatgaaactgctcagtatctaagaaatccaggtgtt
gctcgtcgagcaaattccggatttggtccattagatatttaccaacagcaacagataccc
cctcctgaagagcatgttagtgttctggaaaggaatttgtcaatgcaggatagacttcag
cggggtctctatgacactggatttatgcccttggaacggacaatgtcagtacctggtggt
ggtcctggtgttaatttggatgccgtaaatcctctagtacatgcaccaggtctagaaatg
caagatccaaattcaagaatgcactcagctggtcatatgcctgctttctcgactggcatc
cacttgcaatcttctcaccgtcctccgtttcaatttcatgctccaaatgttgatacaatt
gaaaattattggcccgaaagaaatggtcagttaccagctgattggatggatactaggatg
cagcaactacatcttaaaggtgagaggcaaagaagagattttgatgtcaaaagagcttct
gaagatcaaagtatgtggatgtcagctggtgctaatgatgacagttcaaagcgattactt
atggaactgctccagcaaaagtctggccagcagtcaactgagcaagcagaaatgaccaga
gggattttgtttgagaggggcttacactctggtcacttttctgtgacaaatgcttcaaac
cgttcgttcaaccctcttttggaccaggatacgagtctaaaccaagcttttactgttggg
tcatatggttctaattcagatttgccaccacagagagatcatgtaaatgagattgctgat
agccttgatgcttgtgagagattgcccttcaaatctcattctggagctttagccgaagct
caacccgtcttttccagcatcaatgatgcctctaaggtacatttagaggctcgcgaaagt
attgttaggcaagctggtttgacgactgtagaaggggaaatgccaactaatttgcttagc
aggcacactgcactcgggactggagattgtagtgttttcaaatcatcttcacgtggaagt
ctagacttctacaatgacaagagtgatagaggggattcggctatagaggaaattcccaag
gaacgaatggctgtgacatcaataaggacagataacatcttgccgaagcgtccacctgtc
tcgcgcatttcttcaacccaggagggtttatcggagataaattctgatagcctagcgaga
ggcaaaaatccttcagatggcatggcttctgaagggggtaggaaggaagcgggaggtaat
gctgcaaatcaagttcttggttctgcgacatctgtaaataaagacgggcggtttcgtcga
actgcatcttgtagtgacgctgatgtttcagagacatcattcagtgatatgcttaagagt
aatgttaagaaggcaacagctcaggaggcacatgcatcagaggcaatggatgcaacacag
tatgcccgtagtggtaagaagaaaggaaagaaaggaagacaaattgatcctgctcttctt
ggtttcaaggttacaagcaatcgcatcatgatgggtgagatacaacggatagaagattag
DBGET
integrated database retrieval system
