Solanum lycopersicum (tomato): 101248280
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Entry
101248280 CDS
T02665
Name
(RefSeq) novel plant SNARE 13-like
KO
K08494
novel plant SNARE
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101248280
Membrane trafficking [BR:
sly04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
101248280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
Helo_like_N
GCIP_C
TMPIT
Occludin_ELL
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
101248280
NCBI-ProteinID:
XP_004252947
UniProt:
A0A3Q7JYS6
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All DBs
Position
12:67271915..67278758
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AA seq
270 aa
AA seq
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MANLDLQMNPQMEQIHGEIRDNFRALANGFQKLDKIKDSNRQSKQLEELTGKMRECKRLV
KEFDREIKDEESKSPPEVNKQLNDEKQSMIKELNSYVALRKTYMSSLGNKRVELFDMGAG
GSEPTAEENVQMASEMSNQELISAGNKTMDETDQAIERSKQVVHQTIEVGTQTAATLKGQ
TDQMGRVVNELDTIHFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVVAIIVVKIVNP
HNKDIRDIPGLAPPAPARRLLYLRPGQDFM
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttggacttacaaatgaacccacagatggaacagatccatggagagattcgg
gataatttccgagctctagcaaatggatttcaaaagctggataagatcaaagattccaat
agacagagtaaacagttggaagaacttactggaaagatgagagagtgcaaaaggttagtt
aaagagtttgatcgtgaaattaaagacgaggagagtaaaagtcctcccgaggtcaacaaa
caactcaatgatgagaagcaatcaatgatcaaagagctaaactcatatgtggccttgaga
aaaacgtatatgagcagtcttggcaataagagggttgaactatttgatatgggagcaggt
ggaagtgaaccaacagcagaggaaaacgttcagatggcatcagaaatgtcaaatcaggag
ctcatcagtgctggaaacaagacaatggatgaaactgatcaagccattgaacgctccaaa
caggttgttcaccaaacaattgaagtgggaacacaaactgctgctaccttgaaaggccaa
actgatcagatgggtcgtgttgtcaatgagctcgacacaattcacttctccatcaaaaaa
gcatcccagcttgtcaaggaaattggacggcaggttgccacagataaatgtatcatgctt
ttcctcttcctcattgtctgtggtgtagttgccataattgttgtgaagattgtgaatcct
cacaacaaggacataagggatatccccggactggcacctccagcacctgcaaggagattg
ctatatctaaggcccggacaagatttcatgtaa
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