Solanum lycopersicum (tomato): 101248354
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Entry
101248354 CDS
T02665
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101248354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101248354
03036 Chromosome and associated proteins [BR:
sly03036
]
101248354
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101248354
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101248354
PBAF complex
101248354
GBAF(ncBAF) complex
101248354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
101248354
NCBI-ProteinID:
XP_004233296
UniProt:
A0A3Q7FM30
LinkDB
All DBs
Position
2:54298549..54301703
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AA seq
544 aa
AA seq
DB search
MSVNNNNNPNKNIGGPSSFGNSPPGNPMAHLQAQSQGQQQMPSGFPGAFQLSQLSAAHAQ
AIAQAQSKVQAHAQAQAQAQAAHAQFQAQLQAQGLSLSQAHALGNFGSSSPSMPGSALAK
RLPQKPPVRPPAFTTTNTISPMRTMELSAAARRKKQKLPEKHMNEKVAAILPESSLYTQL
LEFESRVDSALTRKKVDIQESLKNPPTIQKTLRIYVFNSFANQVRTIPKKPTAEPPTWTL
KIVGRILEEGMDPDQAAMFQKTSSMYPKFSTFFKRVTISLDQKLYPDNHIIIWDSARSPA
PQDGFEVKRKGEQEFTANLRLELNYMPEKYKLSPALTEVLGIEVETRARIVSSIWHYVKA
RKLQNPDDPSYFNCDPPLQKVFGEGKVKFNTVTQKITPHLSPPQPIHLEHRIKLSGNNPV
GTACYDVLVDVPFPIQRELNALLANTEKTKEIETCDEAICSAIRKIHEHRRRRAFFLGFS
QSPVEFIDALLESQSKDLKVVSGEPSRNVEKERRSQFYSQPWVEDAVIRYLNRKPAAADA
PGSG
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttaacaataataataaccctaacaagaatatcggaggaccatcttcctttggc
aattcaccgccggggaatccgatggcacatctccaggcacaatcacaaggccagcaacag
atgccttcagggtttcctggggcatttcagctatcgcagctatctgctgcacatgcccaa
gcaattgctcaagctcagtcgaaagttcaggctcatgcgcaagctcaagcacaagctcaa
gctgctcatgcccagtttcaggcccagttacaggctcagggtttatctcttagccaggct
catgctcttggcaattttggttcttcctcaccctcgatgcctggaagtgctttggcaaaa
cgcttacctcagaaacctcctgtgcggccacctgcattcacaactactaacacaatttct
ccaatgagaacaatggagctttcagcggctgctcgtaggaaaaagcagaagcttcctgag
aagcacatgaacgagaaggtggcagccattttgcctgaatcttccctttatactcagctc
cttgagtttgaatctcgggttgattccgctttaacaagaaagaaagttgacatccaggag
tcattgaagaatccacctactattcagaagacgcttcgaatttatgtattcaatagtttt
gctaatcaggttcgtaccattcctaagaagccaacagctgaacctcctacatggactctt
aagattgtaggaaggattttggaggagggaatggatcctgatcaagctgccatgtttcag
aaaactagctccatgtacccaaagttctctactttcttcaaaagagtcaccatttccttg
gaccagaaactctatcctgataaccatattataatttgggactctgcgcgatctcctgca
cctcaggatggttttgaggtcaaaagaaaaggagagcaagagttcactgctaatttaaga
ctagaattgaattacatgcctgagaaatacaaactttcaccagctttaactgaagttctg
ggtattgaggttgagactcgtgctagaattgtctcttctatctggcattatgttaaggct
cgaaagttgcagaaccctgatgatccttcttacttcaactgtgatcctccacttcagaaa
gtttttggggaaggaaaggttaagttcaatacagtcacacaaaagatcacacctcatttg
tctcctccacaacccatacatttggaacacaggattaagctttctggaaataaccctgtt
ggaactgcttgttacgatgtattggttgatgtgccattccctatccagagggagctgaat
gctttgcttgccaataccgaaaagaccaaagagattgaaacttgcgatgaagcaatttgt
tctgctataaggaagatccatgaacatagaaggagaagggctttttttctgggttttagt
caatcccctgttgagtttattgatgcacttctagaatcccagagcaaggacctgaaagtt
gttagtggggagccaagtcgcaatgttgagaaggagcgccggtctcagttttacagccaa
ccatgggttgaggatgctgttatccgctacctgaatcgcaagccagctgctgctgatgcc
cctggaagtggatga
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