Solanum lycopersicum (tomato): 101248457
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Entry
101248457 CDS
T02665
Name
(RefSeq) single-strand DNA endonuclease 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101248457
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101248457
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
Motif
Other DBs
NCBI-GeneID:
101248457
NCBI-ProteinID:
XP_004234386
UniProt:
A0A3Q7G3V7
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Position
3:complement(4127225..4133542)
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AA seq
600 aa
AA seq
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MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVNKSHCAMKEKLYLRGLFHR
VRALIALNCSVIFVTDGAIPAIKSSTYRRRLNLGNVLTQDEAAIKPSSIRRNTGSDFSRM
MKEAKVLGNALGIPCLDGIEEGEAQCALLNSESFCDGCFTSDSDAFLFGARTVYRDMCLG
DGGYLVCYEMDDIERKLGLGRNSLIALAVILGGDYSEGVYGIGRESACQIVKSIGDRAVL
QWIASEGFSLVKKKKGSKKQTEDDKCNGKENAAEHKNPDGSKYPAQMKSQVLQVLDAYLR
PKCHSADSNSVQRILALYPYSRSQLQHICSETFGWPPEKTDEYILPKIAERELRRFANLR
STASQLGVQLPLNEMPIKCPLSQIVKPRKVQGVDCFEVSWEEMDGLETSIVPADLVERAC
PERILEFQERRAQGKKRNNARSRPRKTENPQLLGQIDQKLQDLLLEIDRETSTTNDATSL
CRSVPEDDDDIAHIQVVDTGKQSHYTWNSNCVKKGGDFTYGITSFQESNISQVSSEDEVI
DLTSPPPLQHASGNSKHLEGNVQCIDLVELSDSDNDMFSPEHTRRARELRMFIARIKNTC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtaaagaatctttgggatatcttggaatcttgcaagaaaactcttcctcttcat
catctccagaacaagagggtatgtatagatctatcttgctggattgttcaacttcagaat
gtcaacaaatcccattgtgcgatgaaggagaagctttatctcaggggcctatttcaccgc
gttagagctcttattgctttgaattgtagcgttatctttgttactgatggagccattcct
gccatcaaatcatctacctatagaaggcgattaaatcttggaaatgtgctcactcaagat
gaggcggcgattaaaccttcatcaatacgaagaaacacaggatcagacttttcgcgcatg
atgaaagaggctaaagtccttggaaatgcacttggaattccgtgcttagatgggattgag
gagggtgaagctcaatgcgcattattaaactcagaatcattctgtgatggatgtttcact
tcagattctgatgccttcctctttggagcaagaacggtgtatagagatatgtgccttggg
gatggcgggtatctagtttgctatgaaatggatgatattgagagaaagctcggacttgga
aggaactccttgatagcactggctgttattcttggtggtgattactctgaaggagtttat
gggattggtcgggagtcagcttgtcagattgttaaatcaattggtgatagagctgttctt
caatggattgcatcagaaggattttccttggtaaaaaagaaaaaaggttctaagaaacag
actgaagatgacaaatgcaatggtaaagaaaatgctgcagagcataaaaatcctgatgga
agcaagtaccctgcacaaatgaaaagtcaggtgttgcaagtattagatgcatatctgaga
ccaaaatgccattcagcggactctaactctgttcaaaggattcttgcattgtatccatat
agccgcagccagcttcagcacatatgctctgaaacttttggttggcctcctgagaaaaca
gatgagtatatccttcctaagattgctgaaagggaactgcggagatttgccaacttgcgg
tccactgcatcacaactgggagttcagcttccactaaatgagatgccaataaagtgtcca
ttatctcaaattgtcaagccaagaaaagttcaaggagtcgattgctttgaggtgtcttgg
gaagaaatggatgggcttgaaacctccatagtaccagctgatcttgttgagagggcttgt
ccggagaggattttggagttccaagaaagacgagctcaaggaaagaaacgaaacaatgct
cgatcaagaccaagaaaaacagaaaatccacagcttttgggtcaaattgaccagaaactc
caagacctcttgcttgagattgatagagaaacctctactaccaatgatgccacttcttta
tgtagatcagtaccagaggatgatgacgacattgctcatattcaggtggtagatacaggt
aaacagtcccattatacatggaacagcaactgtgtgaagaagggtggtgattttacttat
gggatcaccagtttccaagagagcaacatttcacaagtttcatctgaagatgaagtaatt
gatctcacaagtcctccaccgctgcagcatgcttctgggaactccaaacacctagagggc
aacgttcaatgcattgatttggttgaacttagtgattcagacaatgatatgttctcccct
gaacatacaaggagagctagagaactgagaatgttcattgcacgaattaagaacacttgc
tga
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