Solanum lycopersicum (tomato): 101248472
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Entry
101248472 CDS
T02665
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
101248472
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sly01001
]
101248472
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101248472
Enzymes [BR:
sly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101248472
Protein kinases [BR:
sly01001
]
Serine/threonine kinases: Other
VPS15 family
101248472
Membrane trafficking [BR:
sly04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101248472
Autophagy
Autophagosome formation proteins
PI3K complex
101248472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
HEAT
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
PK_Tyr_Ser-Thr
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
Cohesin_HEAT
Beta-prop_WDR36-Utp21_1st
TCAD9
Beta-prop_WDR41
APH
Lipoprotein_15
Beta-prop_Vps41
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
101248472
NCBI-ProteinID:
XP_010319242
UniProt:
A0A3Q7G106
LinkDB
All DBs
Position
4:complement(5064748..5074268)
Genome browser
AA seq
1552 aa
AA seq
DB search
MGNKIAKTTQASAMEYYLHDLPSSYNLVLKEVVGRGRFLKSILCKHDEGLVLVKVYFKRG
DFIDLREYEHRLSKIRDIFTSLDHPHVWPFQFWLETDKAAYLLRQYFFNNLHDRLSTRPF
LCLIEKKWLAFQLLYAVKQSHEHGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDD
PSDFSFFFDTGGRRRCYLAPERFYEHGGEMHVSQDAPLKPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQHDPSQLLEKIPDSGIRKMILHMIQLDPESRYSAESYLQNYAGVVFP
SYFSPFLHNFYSLLNPLNSDARVLICQTSFNEILKQMMSDKPGDRNLPAVSPHSVPVSQT
RQVSDMNENLNLVKDSSSNREEIEKGSVHDRFDLLGNVNTLLRDVKQNNQCPVVKPVLED
IANTAYSQKQRQCHIQSPGEQIPVSSISFKRIHHPFLKKITMEDLTVLMSDYDNQSDTFG
MPFLPLPEEVMSCEGMVLIASLLCSCIRNVKLPFMRRGAVLLLNSCSLYIDDEDRLQRVL
PHVIAMLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVR
ICYASNISKLALTAYGFLIHSISLSEAGVLNETNPSQNSSISTSGEPVRPQSLNSDTQLG
QLRKSVAEVIQELVMGPKQTPNIRRALLQDIGNLCWFFGQRQSNDFLLPILPAFLNDRDE
QLRAVFYGQIIYVCFFVGQRSVEEYLFPYIEQALTDTTEAVIVNALDCLAILCKSGFLRK
RFLLEMIDRSFHLLCYPSQWVRRSSVTFIAASSENLGAVDSYVFLVPVIRPFLRRQPASL
ASEKALFSCLKPSISKEMYYQLVENAKSSDMLERQRKIWYNSTPQSKQWETVDLLERSSS
ELDRMKYWPGRKHDFPGYKSASDLTKPIDFTDCDDNPTKVKSVGTLIQDPSSIMDSGDRL
PSEKLQLSGFVSPQVSGMSSFIDKSADGIPLYYFKEDNKRPAGTGVAASDSSFPYTSFGF
GSSSLPWIDPVNKSFNLANSVPAPKLVSGSISIGNSSTLLRRVVHEVEDREADQTAYVSN
KFQDIGSGTSKMGSLTMEDNTAATDRTDLSSFARTSMITDSGWRPRGVLVAHLQEHRSAV
NDISISADHSFFVSASDDSTVKVWDSKKLEKDISFRSRLTYSLEGSRALCVTVLQGSAQV
VVGACDGTIHMFSVDYISRGLGNVVEKYSGIADVKKNEVGEGAVASLLNYCSDGGASKMI
LYSTQNCGLHLLDTRTNSHAWNTKVYPKEGYISSLVAGPCGNWFVSGSSRGVLTLWDLRF
CIPVNTWQYSLACPIERMSLFLPPPSTSLSVAARPLVYVAAGCNEVSLWNAENGSCHQVL
RVANNENEAENSDLPWALAKPSNKANPKQDLRRNNGSKYRVDELSDPPPRLSGIRALLPL
PGGDLLTGGTDLKIRRWDHCSPERSYCVCGPSIKGVVNDDFYETKSSFGVQIVQEAKRRP
LATRQTAKAILGAAAVDAAGCHRDCILSLASVKLNQRLLLSGSRDGAVKVWK
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatcgcaaaaacgacacaagcgtcggcaatggagtattacctccacgac
ttgccgtcttcgtataatctggtgctgaaagaagttgtaggtagaggtcgctttttgaaa
tcaattctctgcaaacacgacgaaggacttgtgcttgtaaaagtctatttcaaaagaggg
gatttcattgatttacgcgaatatgagcatcgtctctccaaaattcgtgacatattcacc
tcccttgatcatccacatgtttggcctttccagttctggcttgaaacagataaagctgct
tatttgttgaggcaatacttctttaacaatcttcatgatcgtcttagtacccgacctttc
ctctgtcttattgagaagaaatggcttgctttccagttgctttatgcagtgaagcagagt
catgagcatggagtgtgtcatggtgatatcaagtgtgagaatgtgctagtcacatcttgg
aactggctttatcttgcagattttgcgtcattcaaacccacttatattccacatgatgat
ccttctgatttctccttcttctttgataccggtggacgaagacgatgctatcttgcaccc
gagagattttatgagcatggaggtgagatgcacgtttcacaagatgctcctttgaagcca
tctatggacatctttgctgttgggtgtgttattgcggagcttttcctcgagggccagcca
ttatttgaattgtctcaactgcttgcttatcgcagaggacaacacgatcccagtcaactt
ctggaaaagattccagattcaggaatccggaagatgattcttcatatgattcaattggac
ccagagtcacgatattcagctgaaagctatctgcagaactatgcaggagttgtgttccca
agctacttctcaccattccttcataatttctattccttgttgaatccccttaattccgat
gcaagggttctgatatgccagacctcttttaatgagatccttaaacaaatgatgagtgat
aagcctggtgacaggaaccttcctgctgtgagtccacattcagttcctgtcagtcaaaca
cggcaagtgagtgatatgaacgaaaatctgaatttagtgaaggactcatcgagcaacaga
gaagagattgagaagggctcagttcatgatcgctttgatctgcttggcaacgtgaacact
ttgctcagggatgtgaaacaaaataatcagtgtcctgttgtgaaacctgtgctggaggat
atagccaatacagcatattctcagaagcaaagacagtgtcacatccaatctccaggtgaa
caaatcccagtgagctccatttctttcaagagaattcaccatccctttttaaaaaagatc
accatggaagatttgactgtgttgatgtccgactatgataatcaatcggacacttttgga
atgcctttcttaccacttcctgaagaagtaatgagctgtgaaggaatggtgctgatagcc
tcattgttgtgttcctgcatacgtaatgtcaagttgccttttatgaggagaggtgctgta
ttgctgttgaactcttgttccttgtacattgatgatgaagatcggttgcagcgagtactt
ccacatgtgatagcaatgctgtcggatccagctgcaattgttcgttgtgctgccttagag
actttatgtgatattcttcctttggttagagattttcctccaagtgatgccaaaattttt
ccagagtatattctccctatgctttccatgcttcctgatgacccagaggagagtgttagg
atttgttatgctagcaatatatcgaagcttgcactaacagcgtatggttttctgattcac
tcaataagcttgagtgaggcaggtgttctgaatgaaacaaatccatcccagaattcatca
atatcgacctcaggggaaccagtacggccacagagtctaaacagtgatacacaacttggt
caattaaggaagtcagttgctgaggttattcaagaactcgtgatgggcccaaagcaaact
ccaaacatcaggagagcactattgcaagacattggtaacctttgttggttttttgggcag
agacaaagtaatgatttcctgttgcccattctccctgcttttctaaatgatagagatgag
cagctcagggcagtattttatgggcaaatcatatacgtctgtttttttgttggacaaaga
agtgttgaagaatatcttttcccatacattgagcaggcactgactgatacaactgaggct
gtaatcgtcaatgctctagattgcttggccattctctgcaaaagtggctttctgcgcaag
cggttcctacttgaaatgatagaccgttctttccatttgttgtgctaccctagccaatgg
gtaaggaggtcatctgtcacctttattgctgccagcagtgagaacttaggagcagttgat
tcttatgtttttcttgtccccgtaataaggcccttccttcgcaggcagccagcatctcta
gcttcagagaaagctcttttctcatgtcttaagccatcaatttcaaaagaaatgtactat
cagcttgtggagaatgcaaagagttcagatatgctggagagacaaagaaagatatggtac
aattcaacacctcagtcaaagcaatgggaaactgtagatttacttgagagaagtagcagt
gagttggatcgaatgaaatactggcctgggagaaaacatgattttccgggttataaatct
gctagtgatttaactaaaccaatcgattttactgactgtgatgataatccaaccaaggtg
aaatcagtgggaaccttgatacaagatccttcaagcataatggatagcggtgatcgcctc
ccctcagaaaaattgcagctatctggctttgtgtctccacaagtcagtggtatgagcagc
tttattgataaatctgctgatggcattcctttgtactattttaaggaggataacaagaga
ccagctggcactggtgtagcagcctctgattcctcatttccatatacatcatttggattt
ggttcttcatccttgccttggattgatcctgtgaacaaatcatttaacttggctaattca
gttccagcacctaagcttgtgtcaggttcaataagcattggcaatagctccacactgttg
cgtagagttgtacatgaagtggaagacagggaagctgatcaaacagcatatgtgagtaac
aaatttcaggacattggatctggtacatctaaaatgggttccctaacaatggaagacaac
acagccgcaacagatagaactgatttgtcatcttttgccagaacatccatgattacagat
tcaggatggaggcctcgtggggttttggttgctcatctccaagagcaccgttctgctgtt
aatgatatatccatttcagcagaccacagcttttttgttagtgcatctgacgattctact
gttaaggtttgggattcgaaaaagctagagaaggatatctcattcaggtcaaggttaact
tattctttagaaggaagccgagctttatgtgttacagtgcttcaaggttctgctcaagtt
gttgttggagcatgtgatggaacaatacatatgttctcggttgattatatctcccgagga
ctcggtaatgttgtcgagaagtactctggtattgctgatgtgaagaagaatgaagtggga
gagggtgctgttgcaagccttttgaactactgttcagatggtggtgcctcaaaaatgatt
ttgtacagcactcagaattgtgggctccatctgttggacacaagaacaaattcacatgcc
tggaacaccaaagtttatcccaaagagggctatatatcatctctagttgcagggccttgt
ggaaattggtttgtatcaggttcctcaagaggtgtacttacactttgggatttgaggttt
tgcataccggtgaacacatggcaatattctcttgcctgcccaattgagagaatgtctctt
tttcttcctcctcctagtacatcattgtctgtagcagcaaggccccttgtttatgttgcc
gcagggtgtaatgaagtttctctctggaatgcagagaacgggagctgccaccaggttttg
agggtagcaaacaatgagaatgaggctgagaactccgacttaccttgggctttagcgaag
ccatcaaataaggctaatcctaaacaagatctaagaagaaataatggttcaaagtaccga
gttgatgaattgagtgatccgcctcctcgcctttctggaattcgtgctttgcttccatta
cctggtggtgatttgttaacagggggtactgacttaaaaatacgtcgctgggaccattgc
agcccggaacgaagttattgcgtttgcggaccatctataaagggggttgttaatgatgac
ttttatgagacaaaatccagctttggcgtacaaatagtgcaggaggcgaagaggcgacct
ttggccaccagacagacagcaaaggcaatcctcggagctgctgccgtcgatgcagctggg
tgtcaccgtgattgtattctctctttggcttctgtcaaattgaatcagagacttctgcta
tcaggtagcagagacggagctgttaaggtttggaagtaa
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integrated database retrieval system
