Solanum lycopersicum (tomato): 101248481
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Entry
101248481 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101248481
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101248481
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Ig_DR_A0283-like
Motif
Other DBs
NCBI-GeneID:
101248481
NCBI-ProteinID:
XP_010320231
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Position
4:complement(63379075..63384197)
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AA seq
633 aa
AA seq
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MAQGVQLHLQDNRHVVMDNGILKVTISVPDGIVTGIRYNGVDNLLEARNPEENRGYWDVV
WSSTGSTSKFERLKCTTYKVILKTKDQIELSFSRKWDVSLQNKLIPLNIDKRFIMLKGSS
GFYSYAIYEHLEGWPDFHLDETRIAFKLRKDKFHYMAMADNRRRYMPLPDDRLPPRGQRL
AYPEAVLLVDPIEPEFKGEVDDKYQYSCDNKDNKVHGWISMDPPVGFWQITPSDEFRSGG
PVKQSLTSHVGPTNLATFLSPHYAGADLIPKFAQGEAWKKVFGPVFLYVNSVKKGEDPVA
LWDDAKIQMQHEVQSWPYSFPASKDFPSANQRGNVSGILLVQDKYTSDGRIPANGAYVGL
ARPGEAGSWQRECKGYQFWAKSDNNGYFSIKNIRRGDYNLYAWVPGFIGDYVYGTPISIT
SGCKINVHEIVYQPPRDGPTLWEIGIPDRTAAEYFVPEPNPKFINNVFINHPDRFRQYGL
WDRYSELYPTDDLVYVIGKSDYRKDWFFAQVTRRKENGMYQGTTWQIRFKLDSVHQGGTY
KLRIAIASATLAEVQVRVNNPSTNQPLFTTGLFGRDNSIARHGIHGLYWLYNIDIQGNLL
VQGDNTIYLGQPRHQSPFQGIMYDYIRLEAPPN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaggagtacagcttcaccttcaggacaatcgccatgtggtgatggataatggc
attctcaaagtgactatatcagtaccagatggaattgtaactggaatcagatacaatggc
gtcgacaatttgctcgaggctcgaaatcctgaagaaaacagaggatactgggacgttgtc
tggagctcgacaggaagtacttcaaaatttgaaaggctcaaatgcacaacctataaggtc
attttgaaaacaaaggatcaaatagagttgtcgttctcaaggaaatgggatgtgtcgctt
cagaacaaacttattcccctgaacatagacaaaaggtttataatgcttaaaggttcctca
ggattctattcttatgcgatttatgaacatttagagggatggcctgatttccaccttgat
gagactaggattgcattcaagctcagaaaagacaagtttcattatatggccatggcagat
aacaggcggagatatatgcctttacctgatgacaggttaccacctagaggacaacgtctt
gcttatccagaagcagtcctacttgttgatcccatcgagcctgagttcaaaggcgaggtc
gatgataaataccagtactcgtgtgataataaagacaacaaggtccatggctggatatct
atggacccacctgtgggattctggcaaattacaccgagtgatgaatttcgatctggtgga
cctgtcaaacagagccttacatcccatgtcggtccaactaatctagctacatttctaagc
cctcattacgctggagctgatctaataccaaagtttgcacaaggtgaagcctggaagaaa
gtttttggccccgtgtttttatatgttaattctgttaagaaaggagaagatcctgtcgct
ctatgggatgatgccaagatacagatgcagcatgaagttcaaagttggccttacagtttt
ccagcctcaaaagattttccgtcagcaaatcaaaggggcaatgttagtggtatacttttg
gtgcaagacaagtacacgagtgatggtcgtatacctgcaaatggtgcgtatgttgggctt
gctcgaccaggagaagctggttcctggcaaagagaatgcaagggctaccaattttgggct
aaatcagacaacaatgggtacttctccataaaaaatatacgtcgcggtgactacaatctt
tatgcatgggtccctggattcattggggactatgtatatgggactcccatttccataact
tcaggttgtaaaattaatgtgcacgaaatcgtatatcagcctccaagagatggacctaca
ttatgggaaataggcattcctgatcgtactgctgcagaatattttgttcctgaacccaac
ccgaaatttatcaacaacgttttcatcaatcatcctgacaggtttaggcaatatggattg
tgggataggtactccgagttatatccaacggatgaccttgtgtatgtaattggaaaaagt
gactacagaaaagactggttttttgctcaggttacaaggagaaaagagaatggcatgtat
caaggaacgacatggcaaattagatttaaacttgattcagtccatcaaggaggaacatat
aaattgcgcattgcaattgcatctgcaactttagctgaagtgcaggttcgggtgaataat
ccgagcacaaaccaacctctatttacaacaggattgtttggaagagacaactcaattgct
aggcatggaattcatggattatattggctgtacaatatagacatacagggaaatctgcta
gtgcaaggggacaacaccatttacttaggccaaccaagacatcaaagtcctttccaaggg
attatgtatgactatattcgtctcgaagctccaccaaactaa
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