Solanum lycopersicum (tomato): 101248503
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Entry
101248503 CDS
T02665
Name
(RefSeq) KH domain-containing protein At4g18375 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101248503
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
101248503
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
101248503
NCBI-ProteinID:
XP_004244971
UniProt:
A0A3Q7HLD4
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Position
8:complement(15212035..15216992)
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AA seq
617 aa
AA seq
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MGETGKRSRRDDGDNKNQKRRTDRDEKNDDELIVYRILCPNNVIGSVIGKNGKVINSIRS
ETKAKVKVVDPFPGAKDRVILVYCYVKEKEDVEVDQDFNEKQPLCTAQDALLKVYTAIAN
ALAAIGESDKKRKDKEECQLLAPSSQSANIIGKSGTTIKKLRSKMRANIKVVARDASDPT
HSCALEFDNFVLITGDPESVRRSLFAISAIMYKFTPKEEIPLTTNVPEVRPSIIIPSDVP
IYPGAGIYPNVDPIMPSRSVPSVLGTTQIPELPGYVDAGSTWPLYSSGLPMVSGYSGASQ
TEELTIRVLCPTNNIGRVIGKGGASIKSVRQTSGARIEVCDAKADRDQCIITVISTESVD
DLKSMAVEAVLLLQGKINDEDEDTVTFRLLVPSKIIGCIIGKGGSIINEIRKRTRADVRI
SKGERPKCADSNDELVEVSGEVSSVRDALIQIVLRLRDDVIKGQEGNHNPSAALRAGATG
FSLAPVLPNVPPAAPLSFEHRIETGNGVGMRSSGSRYGHESLSIGEDTYGTFSSYSSKLY
GGLPPPSAVEMVIPGHAVGKVMGKGGSNIDNIRKISGAAVDIIDSKSSRGDQIAIISGTQ
EQKRAAENLIQAFIMAT
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagactggaaaaagatcgcgtagggatgatggggataacaagaaccagaagagg
aggacagatagggacgagaaaaacgatgatgagctaatagtttacagaattctgtgtcca
aataatgtgattggaagtgttataggaaagaatggaaaagttataaattcaattaggtct
gagactaaggcgaaggtcaaggtggtggatccatttccaggtgctaaggatagagttata
ctcgtttattgctatgtaaaggaaaaggaagatgttgaggttgatcaggatttcaatgag
aaacaacctctttgcacggctcaggatgctcttctcaaggtttatacggcaattgcaaat
gctttggctgcaattggagaatctgataagaagcggaaggataaagaggagtgtcagctt
cttgctccttcaagccagtctgctaatatcattggtaaatctggtaccaccataaagaag
ttgagaagcaagatgagggccaatattaaagtagttgccagagatgctagtgatccaaca
cattcttgtgcactcgagtttgataactttgttctgataactggtgacccagaatctgtt
aggagatcactctttgctatttctgcaatcatgtacaaattcacacctaaggaagaaatt
cctcttactaccaatgttcctgaagtacgtccaagtattattatcccttcagatgttccc
atatatccaggagctgggatttatccaaatgtggatcctattatgccatctcgttctgtt
ccatctgttttgggtaccacacaaataccagagcttccgggttatgtggatgcaggaagc
acatggcctctttattcttctggtcttcccatggtttctggttacagtggtgcctctcaa
actgaggaattgactattagagtgctgtgtccaactaacaatattggtcgtgttattggc
aagggaggagcttcaattaaaagtgtaaggcaaacaagtggtgctcgtatcgaggtttgt
gatgccaaagctgatcgtgatcagtgcattatcacagtcatttccactgagtcagtggat
gatcttaaatccatggcagttgaagctgtacttctgctgcaagggaaaataaatgacgaa
gatgaggatactgtaacttttcgtctacttgttccatctaagattattggatgtatcatt
gggaaaggtggttcaatcattaatgaaatccggaagagaactagagctgatgtacgtatc
tcaaaaggcgagaggcccaaatgtgcggattcaaatgatgaacttgttgaggtgtctgga
gaagttagtagtgtgagggacgcccttatccagattgtactgaggctcagagatgatgtt
ataaaaggccaagaaggtaatcataatccatctgcagctttacgcgctggtgctactggt
ttctcattggctccagtgttgcccaacgttcctccagctgctcctttgagctttgaacat
aggattgaaactgggaatggtgttggaatgcgttcttcaggcagccgatatggtcatgag
tcgctctcgataggggaagatacctatggaacgttctcttcatattcctcaaagttatat
ggcggattgcctccaccctcagctgtagagatggttatcccaggacatgcagtcggtaaa
gttatgggtaaaggtggctcaaacatagataatattcgcaagatatctggagcagctgtg
gatataattgattccaaatcctctagaggtgatcagattgctataatatctggtacgcag
gaacagaagcgtgctgctgagaacttaattcaggcattcataatggcgacatga
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