Solanum lycopersicum (tomato): 101248505
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Entry
101248505 CDS
T02665
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 isoform X1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00541
Biosynthesis of various nucleotide sugars
sly01100
Metabolic pathways
sly01250
Biosynthesis of nucleotide sugars
Module
sly_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
101248505
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
101248505
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-GeneID:
101248505
NCBI-ProteinID:
XP_019070619
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Position
8:59586304..59591119
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AA seq
676 aa
AA seq
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MSSEPAPYVPKNVLITGAAGFIPSHVTNRLTKLYPNYRIVALDKLDYCSSLKNLEPSYSC
PNFKFVKADITSADLINHLLVEEKIDTIMHFAAQTHVDNSFGNSFEFTINNIYGTHVLLE
ACKLTKCIKRFIHVSTDEVYGETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYNRS
YGLPTITTRGNNVYGPNQFPEKLIPKFIILAMKGERLPIHGDGTNVRSYLYSADVAEAFD
VILHKGVIGHVYNIGTKKERAVLDVAADICKLVGKNAKEVIELVQDRPFNDQRYFLDDQK
LKKLGWQERTTWEAGLKMTLDWYTKNPDWWGDITGALHPHPRISNIAPSHDEGCLLQLVK
GSKKASGSDLKFLIYGKTGWIGGLLGKICEERGIAYEYGLGRLQDRSSLMQDMIRVKPTH
VFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREADILVMNFATGCIFEYDEQH
PLGSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYNNVCTLRVRMPISSDLSNPRNFITK
ITRYDKVVNIPNSMTVLDELLPISIEMAKRNCRGIWNFTNPGVVSHNEILEMYRDYIDPK
FKWQNFDLQEQAKVIVAPRSNNELDMTKLKNEFPELLSIKDSIIKLLYNEGFIRCAQSAY
PKSRCSDRNYSGYGLS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgaaccagctccttatgtacccaaaaatgtcctcataacgggtgcagcaggc
ttcattccgtctcatgtaaccaatagattgaccaagctatatcctaactacaggattgtt
gctcttgacaagctcgattattgttcgagtctaaaaaatttggagccaagttactcgtgt
ccgaatttcaaatttgtcaaggctgatattactagtgctgatcttatcaaccatcttctg
gttgaggagaagattgatacaattatgcattttgcagcacagactcatgtggataattca
tttggaaattcgtttgagttcaccattaataatatttacggtactcatgtgcttcttgag
gcttgtaagttgactaaatgcatcaagagattcattcatgttagtaccgatgaagtttat
ggcgagactgatttggaaactgacattggcaatcctgaagcttctcaactccttcctact
aatccatattccgcgactaaagctggagcagaaatgcttgtcatggcttataataggtct
tatggcctaccaacaatcactactcgagggaataacgtgtatggcccaaatcagttccct
gagaagttgatcccaaagttcattattctagcaatgaagggtgagcgtttgccaattcat
ggcgatggaacaaatgttaggagctatttgtactctgctgatgttgctgaggcatttgat
gtgatactgcacaaaggggttattggacatgtgtataacattggtactaagaaagagagg
gcagttttggacgtggctgcggatatatgcaaattggttggaaagaatgctaaagaagtt
atcgagcttgtacaagataggccttttaatgatcaaaggtatttcctggatgatcaaaag
cttaagaagttagggtggcaagaaaggactacttgggaggcaggactaaagatgacactc
gattggtacacaaaaaatcccgattggtggggtgatataaccggagcccttcacccacat
cccagaatctcaaacatcgcgccttcacatgatgaagggtgtctgttgcagcttgtaaaa
ggaagcaagaaagcatctggctcagacttaaagttcttgatttacggaaaaacaggttgg
attggagggttgttaggaaagatttgtgaagaacgtggaatagcatacgagtatggatta
ggacgactacaggataggagttctctaatgcaagacatgataagagtaaagccaactcat
gttttcaacgcggctggtgttactgggaggcctaatgtggattggtgtgaatcacacaaa
gtagaaacaattagaacgaatgttgctggtacactaactttagctgatatctgcagagag
gctgatatcttagtgatgaatttcgcgacaggttgcatatttgaatatgatgagcagcat
ccactaggctcaggcatcggattcaaagaagaagacaaaccaaattttacaggatccttc
tactcgaaaaccaaagccatggtggaagagcttctaaaagaatacaacaacgtttgcact
ctcagagtaagaatgccaatatcatcagaccttagtaacccaagaaacttcatcacaaag
atcacgcgttatgataaagtggtaaacatcccaaacagcatgacagttctagatgagcta
ctaccaatctctatcgaaatggcaaagagaaactgtagaggtatatggaacttcacaaat
ccgggagttgtgagccacaacgagattctagagatgtacagagactacattgatcctaaa
ttcaaatggcagaatttcgatcttcaagaacaagctaaagtgatcgttgcaccgcgaagt
aacaatgagcttgacatgacaaagctgaaaaatgagtttccagaattgctatcaatcaaa
gattcaatcatcaagctattatacaatgaaggatttatccggtgcgcacaaagtgcttac
ccgaaaagcagatgctccgacagaaattatagcggttacggattatcctga
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