Solanum lycopersicum (tomato): 101248519
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Entry
101248519 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101248519
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101248519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
ERAP1_C
CEP104-like_TOG
TFCD_C
Ig_GEX2_N
RYDR_ITPR
Motif
Other DBs
NCBI-GeneID:
101248519
NCBI-ProteinID:
XP_010326859
UniProt:
A0A3Q7I8N5
LinkDB
All DBs
Position
9:complement(68848294..68867911)
Genome browser
AA seq
2680 aa
AA seq
DB search
MATHSDMYAVKSLNKSPGRRRFTFKTFSERIEDVDIDVYRNLDPLKAEPTEGSSFFRDCI
TEWRELNTAEDFISFYEEIFPLVQTLPQIILQKELIVAKLLSRLDMKGRLSLEPILGLIA
ALSRDLLEDFLPFLQRIADSLACLLKSGADREPDIIEQIFRSWSFIMMYLQKYLVKDVVD
VLKVTVQLRYYPKEYVHEFMADSVSFILRNAPVKQLIKGVRKLMFEVAKKPLEIRKSAVS
SLLWYVVRGSPSRLHSRAEQVLRLLTDKSLFVIGDQFTGGAEAILEVLVLALQRLCEELE
ATELELMWVCLYDEITECVTQGHLLHLGRLLSLLVSTLQASYIQKISDYQGLLQLIQLLV
QTYILPYPTVKEIDQASNVVDKVMQSMLCIFDGLYRANNISTLSSVSMQWAPVFDLRNKS
LLSFVEDLLLKDPCIVHFFRASIISALNDMIEISEEEVIHLLQIFFKRLPAQGHSFLDEV
PNEKLSRIHSFLREGIGRWILRIQKKPYSAQIDENELAILWGIVACYPIAGGSANESLLM
DLVKALDELLSTESADIAGHPRTTWQSLVGAALGSYCKLVATQNSRFDDSVVSSFLDLAR
KHKTCSQVLSPVADFLDSVCGSIIQADASTKKYHPELVVSKLVDTLGVFAANLSHHDKNL
RLSTLRILCHYEPLTDVSSANEQPFEKKVRMDNPQSTLVDYHGNDVIHLLLLIEETPLSI
VTSRKVILLISKIQMSLSSGRVAEEYMPVVLSGIIGIFHNRFSYLWNPTFDCIAVLLSQY
FGLLWDRYIEYLDHYLSVFLGSCDEAAQSKGESLETASDLNGSFRTYVCPVSDGASCATV
FSLLIQCLQRIPSVAESRSRQIIPLFLKFLGYNIEDLKSVELYNQESCKGKEWKSVLQEW
LSLFRLMRNPRSFYLNQFFKEVLLYRLLEEDDADLQSKVLDCLLNWKDDFLLPYEQHLKN
LINSKSLREELTTWSLSRESDLVDTRHRAFLVPIVIRVLSPKVRKLKALASRKHASVHHR
KAILGFLAQLDVEELPLFFALLIKPLVSASQGAAAKSAWPWTTPGVLQHGLDSFSVLEHF
SRDCINAISWKKRYGFLHVIEDIVAVFDEVHISPFLDLFMGCIVRLLDSCTSTLEGTRND
GALADHAHQLEDKIVTNMAAKQCKDLRSLCLKIISFILSKFEDHDFSPEFWDLFFMSVKP
LVASFKQEGASSEKASSLFSCFLAMSRSSKLVPLLSREKNLVPDVFSMLAVSTASDAIVS
SVLKFVENLLYLDIELGNEDNLLRRLLLPHVDVLVCSLHHLFVHDGAHKRKIVKYPGEKE
LNVFKLLSKHIKGPLAARKFLDILLPVLSKRSKDPEICVGSLQIIKDIVEPLGSESSKKI
VKSVSPLVISAGLDVRTSICDVLDAVAENDSSVHPTANLLRELNATSTVELGDLDYDTVI
AAYEKISADFFHTVPEEHALIILSHAIHDMSSGDLILRQSAYKLLLSFVEFSSQIVDREL
KSEQESSGAWVRHILSNFFLKHMGTAMNKEDTIKKVWIDLLRDMVLKLPTVEDFRSFAVL
YSEDPEQDFFNNIVHLQRHRRARALLRFKNVISSGNLSKVLINKVFIPLLFKMLLDGQVG
KGENIRSACLEAVGSISKFMDWRLYYALLNRCFREMTLKPDKQKVLLRLISSILDQFHFS
ETTSDHVTKDSMQDIQNTSLIESGKVIGFSELSEIQKCLQKDMLPRVHKMLTADTDNLNV
NISLILLKLLKLLPGDIMESHLPSIMHRIANFLKNRLESVRDEARAALAACLKELGLEYL
QFVVKVLRGTLKRGFELHVLGFTLNFLLSKFLLNPSSGKLDYCLEDLLSIAVNDILSDVS
EEKEVEKIASKMKETRKQKSYDTLKLIAQSITFKTHALKLLAPILKHLQKQLTPKVKSKF
ENMFSHIAAGIQCNPSVNQTELFIFGYGLIKDGIKDESPGRAETSTLMEGKQKKDEVSSQ
IAKSDKLIGVDPRYSHLITEFALGVLQNYMKNMKFDKKDEQLLSMLDPYVRLLGECLNSK
YENVMSASLRCLSPLVRLPLPSLESQAEKIKHSLLNIAQGSVTSSNPLLESCVKLLTVLL
RSTKITLSTDQLHMLIQFPLFVDLERNPSFVALSLLKAIVSRKLVVAEIYDIVNRVAELM
VTSQVESIRKKSSQILLQFLLDYHISGKRLQQHLDFLLSNLRYEHSTGREAILEMLHAVI
MKFPISIIDEQSQTFFLHLVVCLANDRDNRVRSMTGTVIKLLVGRVSPRSLQSILEFSRS
WYLGDKPHLWSAAAQVLGLLIEVLKDGFQKYIDSLLPVMRNILQSAVNVLTNKQVDLPND
ATISSWKEAYYSLVLFEKILNQFPKLCFRKDFEDLWEAICELLLHPHLWLRNISNRLVAC
YFATVTEACKENLELPQGTYFLMRPSRLFFIATSLCCQLKVLQTDDAASDLITQNLVFSI
CSLHSFLGKTECKDKFWSTIEHDEQGLLLKAFQQLDSRKGKNIYLSLVSDLSDQEDEGQR
YLVISYLLKTMGKISLHVEDMQMRIIFNCFKSVSPKLIDQSRLLSPEGEVDCQSFAYHML
LPLYKVCEGFAGKVISDDVKQLAEGVRGSISNVIGTHIFVQIYSHIRKNIKSKRDKRKQE
EKVIAVVNPMRNAKRKLRISEKHKAHKKRKMMAMKMGRWM
NT seq
8043 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacattcagatatgtatgctgttaaatctctcaacaaatccccgggtcgccgc
cgttttactttcaagacattctcagagcggattgaggatgttgacattgatgtgtacaga
aatcttgaccctttaaaagctgagcccaccgaaggttcctccttcttccgggattgcatt
acggaatggagagaattaaacacggcagaggattttatttcattttatgaggaaatattt
cccttggtacagacgctaccacaaattatactgcagaaggaactgatagttgcaaagctt
ctttcgagactggacatgaaagggagactatcccttgagccaatcctcgggttgattgca
gcattatctagagatctcctggaggacttcttaccctttctccagaggattgctgactct
ttggcatgtcttctcaaaagtggtgctgatagggaaccagatataattgagcagattttc
aggtcatggtcttttattatgatgtacctgcaaaaatatcttgttaaagatgttgttgat
gttctaaaggtaacagtacaattaagatactatcccaaggagtacgtccatgaatttatg
gccgactcagtatcattcatattgaggaatgctcctgttaaacaacttataaaaggtgtg
aggaagcttatgtttgaagttgcgaagaagccactggaaataagaaagtctgctgtcagt
tcactattgtggtatgttgtgagaggaagcccctcaaggttacactcaagggctgaacaa
gtgttacgcctactgactgacaagtctctgtttgtaataggtgatcagttcacagggggt
gctgaggctattcttgaagttcttgttttagcactgcagagattatgtgaggaattggaa
gctacagagttggagttgatgtgggtttgcttatatgacgagataacggagtgtgtaact
caaggccacctgttgcaccttggtcgccttttgtcccttctggtttctaccctgcaagct
agttacattcagaaaatttctgattaccaagggttgctacaattgatccagttacttgta
cagacttacattctgccttatcctactgtgaaggaaattgatcaagcatcaaatgttgtt
gacaaagttatgcagtcaatgctttgcatttttgatggtctatatagagctaataatatt
tctactctctcttctgtttcaatgcaatgggctcctgtgtttgatttgaggaataagagt
ttgctgtcttttgtcgaagatcttctattgaaggacccttgcattgtccatttcttcaga
gctagcattataagtgcattaaatgatatgattgagatttcagaagaagaggttatccat
ttgctgcagatcttttttaagaggctgccagcacaagggcatagcttcttggatgaagtt
ccaaatgagaagctttcaagaattcatagttttctccgagaaggcattggccgctggatt
ctgcggattcaaaagaaaccatattctgcccaaattgacgaaaacgagttagccattctg
tggggaatcgtagcctgttaccctatagcaggtggttcagcgaatgagtcattgctaatg
gacttggttaaagctctagatgagcttttgagtactgaatctgctgacattgctgggcat
cccaggactacctggcagagcttggttggtgctgcattgggttcttattgcaagttagtg
gccactcaaaattccagatttgatgattctgttgttagcagtttcttagatctggcaagg
aagcacaagacatgttctcaagtgttgtctccagtagctgattttttggattcggtttgt
gggtccataatccaagctgatgcaagcactaaaaagtatcacccagagcttgtagtgagt
aagttggtggataccttaggcgtgtttgctgcaaatttgagccaccacgacaagaatttg
cggctttcgaccctgagaatattgtgccactatgaacctttgactgatgtcagttctgct
aatgaacagccctttgagaagaaagtgagaatggataatcctcagagcactcttgtggat
taccatggcaatgatgttattcatctcctacttttgattgaagaaacgcctctttctatt
gtgaccagtagaaaagtcatcctactgatatccaaaatacagatgagtttatcttccgga
agggtagctgaagagtatatgcctgttgttctcagtggaattattggaatctttcataac
cgttttagctatttgtggaacccgacatttgactgcatagctgtcctccttagtcaatac
tttgggctgttgtgggacagatatattgagtaccttgatcattatctgtctgtttttctg
ggttcttgtgatgaagctgctcaaagcaagggggaatcgttagaaacagctagtgatttg
aatggaagctttaggacttatgtctgtccggtgtctgatggtgcgtcatgtgcaacagtt
ttttccttgttgattcagtgcttacagagaattccatctgttgctgaatcgcgttcacga
caaatcatacctctgttcttgaagttcctaggctataatattgaagatcttaagagtgtg
gaattatacaatcaggagagttgtaaggggaaagagtggaaaagcgttcttcaagaatgg
ttgtccttattcagactgatgcgaaaccctaggtctttttatctcaatcaattcttcaag
gaggttttactgtacaggcttcttgaggaagatgatgctgacttgcaaagtaaggtcctt
gattgcctgttaaattggaaagatgacttcttacttccatatgagcagcatctaaaaaat
ctgataaattcgaaaagtctgagggaggagctcactacgtggagcttatctagggaatca
gatcttgttgatacgaggcatagagctttccttgtgcctattgttatcagagtactgtct
ccaaaagtcagaaagttaaaggcgctcgcttctcgtaagcatgcaagtgtccatcatcga
aaggcaattcttggcttcttagctcagctagatgttgaagagcttcctcttttctttgct
ttgctgataaaaccccttgtatcggcttcacaaggtgctgcggcgaagagtgcatggccc
tggactacacctggagttcttcagcatgggcttgactcatttagtgttttggagcatttt
tccagagattgtatcaatgccatttcatggaagaagagatatggttttctacatgtaatt
gaggatattgtagctgtttttgatgaagtgcacattagcccttttcttgatctgtttatg
ggatgcattgtgcgtctcttggacagctgtacatcaactcttgaaggcacacgaaatgat
ggggcgctggctgatcatgctcaccaactagaggataaaatcgtgacaaacatggctgca
aagcagtgcaaggatttgagatctttatgcctgaagattatctcttttatccttagcaaa
tttgaagatcatgatttcagtcctgaattttgggatttgttctttatgtcagtaaaaccc
ttagttgccagtttcaaacaggaaggtgctagtagtgagaaagcaagctcgttattctct
tgttttctggctatgagtagaagttccaaacttgtgcctctgttgtctcgagaaaagaat
cttgtacctgatgtattttcgatgttagcagtctcaacagcatcagatgccatcgtttcc
tcggtactcaagtttgtggagaatctgttgtatcttgatattgagctaggtaatgaagac
aacctgcttaggagattactgcttcctcatgttgatgtactagtatgcagtttgcatcat
ctttttgtacatgatggtgcacataaaaggaagattgttaaatatcctggggaaaaagag
ctcaatgtcttcaagcttttatcaaagcacataaagggaccattggctgcaaggaagttt
cttgacatcttgcttccggttctgtcaaagagatccaaagaccctgaaatttgtgtaggc
agtttacagattattaaggatattgtagaaccattgggtagtgaaagcagtaaaaagatc
gtcaaatctgtttctccactcgtaatttctgctggcttggatgtccgtacttctatttgt
gatgttcttgatgctgtcgcagagaatgattcttctgtacatcctacggcaaatcttctt
cgtgaattgaatgccacgtctactgtagagttgggagatcttgattatgataccgtgatt
gctgcttatgaaaagataagtgcagattttttccacactgtcccggaagagcatgccttg
attattctgtcacatgctattcatgatatgtcatccggggatcttattttgagacagagt
gcatataaattgttgctttcgtttgttgagttttctagtcaaatagtcgatagagagttg
aaatctgaacaagaatcttctggagcctgggttaggcatatactaagcaacttctttttg
aagcacatgggtactgcaatgaacaaagaagatacaatcaagaaggtatggatcgatcta
cttcgagatatggtcctgaagcttccaacagtggaagacttcagatcatttgcagttctt
tacagtgaagatccagagcaggacttcttcaacaatattgtgcatttgcaaagacatagg
cgagcaagggctttgttacgctttaagaatgtcatcagttccgggaatctatctaaggtt
ctcataaataaggtgtttatccctctactctttaaaatgttgcttgatggacaagttgga
aagggtgaaaatattagaagtgcatgtttggaagctgttggatcaatttctaaattcatg
gactggagattgtattatgcattactcaatagatgctttcgggaaatgacactgaaacca
gataaacaaaaggtgttattgcggttaataagctccatcttggaccagttccatttctca
gagactacttctgatcatgttaccaaggattctatgcaagatattcaaaatactagtttg
atagagtctggcaaagtcattggcttttctgaactttcggaaatacaaaagtgtctccaa
aaggatatgcttcccagggtacacaaaatgttgactgctgatactgataatctcaatgta
aacattagtttaattctgcttaagttgctcaagctacttcctggagacatcatggaatcg
caccttccatctataatgcaccgcatcgcgaatttccttaagaatcgtttggaaagtgtt
cgtgatgaagccagagctgctttggctgcttgtttaaaagaactagggctggagtacttg
caatttgttgtcaaagtcttgagaggcactctgaagagaggatttgaattgcatgtttta
ggattcactctcaattttctactatcaaagtttcttctaaatcccagtagtgggaagttg
gattattgtttagaggatcttctctccattgcagtaaatgatatacttagtgatgtttca
gaggagaaagaggttgagaagattgcttcaaagatgaaagagactaggaagcagaagtca
tatgatacccttaaattgattgcccaaagcattacattcaaaacacatgctctgaagctg
cttgcgccgattcttaagcatttacagaagcagctgactccaaaagtaaaatcaaaattt
gagaatatgttctctcatatagctgctggaatacagtgtaatccttccgttaaccagacg
gaactctttatctttggatatggtcttattaaagatggcataaaagatgaatctccaggg
cgtgcagagacatcgacgctaatggaaggtaagcaaaagaaagatgaagtaagcagccag
attgctaaatcagataagttgatcggcgttgatccacgatattcccatcttattactgag
tttgctcttggagtgcttcagaattacatgaagaacatgaaatttgacaagaaagacgag
cagttgttgtcaatgctagatccatatgtaagattattgggtgaatgcttaaactcaaaa
tatgagaatgtcatgtctgcctcacttaggtgcttatctcctctggtgaggctccctttg
ccatctcttgaatctcaggcagagaagataaagcattcattactgaatattgctcaaggt
tcagtaacttccagtaacccattattggagtcttgcgttaagttgctaactgtgcttttg
cgaagcactaagatcacactttctactgatcaactgcatatgctaatccagtttcctctt
tttgttgatcttgaaagaaatccctcttttgtggctctctcactgttgaaagcaatagtg
agtaggaagttggtagttgcagaaatctatgatatagttaaccgtgttgcagagttgatg
gtgactagtcaagttgaatcaattcgtaagaaaagcagccaaattttgttgcagttttta
ctggactaccatatatccgggaaacgtcttcaacaacatcttgatttcttactttcaaac
ttaagatatgagcattcaactggaagagaagctatccttgaaatgcttcatgctgttata
atgaaattccctattagcatcatagatgaacaatctcagacgttttttctgcatttggtg
gtttgtctggcgaatgatcgtgacaacagagtccgttcaatgactggtacagtcataaag
ttacttgttggacgagtcagcccccgctcactccagtcaattcttgagtttagtcggtcc
tggtatctgggagataaaccacatttatggagtgctgcagcacaggttttggggttactc
attgaagtacttaaagatggtttccaaaagtatattgatagccttctacctgttatgaga
aacatcttgcaatctgctgttaatgttcttacaaataagcaagtggatctaccgaatgat
gcaacaatttcatcttggaaagaagcatattattcactggttctgtttgagaagatatta
aatcaatttcctaagttgtgcttcagaaaggattttgaggatctgtgggaagcaatctgt
gagttgcttttgcatccgcatctgtggttgcgcaacatatcaaaccgtcttgtggcttgc
tactttgccactgtgactgaggcttgtaaagaaaaccttgaactgccacaaggaacttac
tttttgatgaggccaagtagacttttcttcatagctacttctctttgttgccaactgaag
gtgttgcagactgatgatgctgccagtgatctcattactcaaaatcttgtattttcaatt
tgctctctgcattcattcttaggaaaaactgaatgtaaagataagttctggtccaccatt
gaacatgacgagcagggtcttctacttaaggcttttcaacagcttgattcaaggaaaggg
aaaaacatctatttgtctcttgtgtctgaccttagtgatcaagaagatgaaggccagcgc
tacttggtcatttcttatttgcttaagacaatgggaaagatttcccttcatgtggaggat
atgcagatgagaattatcttcaattgtttcaaatcagtttcaccaaagcttatagatcag
agtagattgttgtcccctgaaggtgaggttgattgccaaagctttgcatatcatatgctg
ttgcccctgtacaaagtttgtgaaggatttgccggaaaagttatatcagacgacgtgaaa
caactggctgaaggagtgcgggggagcataagcaatgttataggaacacatatttttgtc
caaatctacagtcatataaggaagaatatcaaatcgaagagggataagaggaaacaagaa
gagaaggtcattgctgtcgtcaatccaatgagaaacgccaagagaaagctgcggatctca
gaaaagcataaagcacacaagaagaggaaaatgatggcaatgaagatgggaagatggatg
tag
DBGET
integrated database retrieval system