KEGG   Solanum lycopersicum (tomato): 101248559
Entry
101248559         CDS       T02665                                 
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03010  Ribosome
sly04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    101248559
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101248559
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sly03011]
    101248559
   04121 Ubiquitin system [BR:sly04121]
    101248559
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sly04147]
    101248559
Ribosome [BR:sly03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    101248559
  Archaea
    101248559
Ubiquitin system [BR:sly04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   101248559
Exosome [BR:sly04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101248559
  Exosomal proteins of colorectal cancer cells
   101248559
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 101248559
NCBI-ProteinID: XP_004252948
UniProt: A0A3Q7JDE8
LinkDB
Position
12:complement(68505763..68508331)
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccctgacgggcaagaccattaccttggaggtagagtcatca
gacaccattgacaatgttaaggctaagattcaagacaaggaaggcattccaccagaccag
cagcgattgattttcgccggtaagcagctcgaggatggccgaacgctagctgactacaac
atccagaaggagtccaccctccaccttgtcctccgtctccgtggtggtgccaagaagcgt
aagaagaagacttacaccaagcctaagaagatcaagcacaagaagaagaaggttaagctc
gctgtcctccagttttacaaggtcgatgattctggcaaggttcagaggctccgcaaggag
tgccccaacgctgagtgtggcgctggaaccttcatggctaaccattttgacaggcactat
tgtggtaaatgtgggcttacctatgtttaccagaaggctggtggtgattag

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