Solanum lycopersicum (tomato): 101248608
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Entry
101248608 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X2
KO
K08518
syntaxin-binding protein 5
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101248608
Membrane trafficking [BR:
sly04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101248608
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
101248608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_VPS8
Beta-prop_THOC3
WDR55
Lgl_C
Synaptobrevin
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_HPS5
TFIIIC_delta
Beta-prop_WDR5
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_Aladin
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
101248608
NCBI-ProteinID:
XP_010326061
UniProt:
A0A3Q7IRW5
LinkDB
All DBs
Position
9:complement(785245..799855)
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AA seq
1103 aa
AA seq
DB search
MFAKKLFQKATQYHHNHHHQTNGSGLTASDLNVRATVHYGIPSTASILAVDSVQRLLAIG
TLDGRIKVIGGDNIEGLLISPKQLPYKYLEFLQNQGFLVSITNENDIQVWNLKSRSVACD
LQWESNITAFSVINGSSFMYVGDEYGTISVLKFHVENRELLQLPYQIIWSSLSEATSFPY
SDHQPVVGILPQPFTSGNRLLIAYECGLIILWDVVEAHVIIVKGDKDLHLKDGAFKKNAD
SSSPNDLLQHQFEEKEITTLCWASIDGSILAAGYIDGDILLWKMSKSSASKGQEAGPFDN
VVKLQLSSVEKRLPIIVLHWWANSKSQNNSDGHLLIYGGDEIGSDEVITILTLEWSSGIE
TLKCVGRVDLTLSGSFADTILLPTTGATTPDGKAALFVLMSPGQLNLFDCSTLADLVSKE
EKKVSLSAKDFPVELPTVDPSMTATKLTQLHSDGNLTELLQEFFAATSSGASRWPLTGGV
YNHTSRAETNRIQRVFIAGYQDGSVRMWDATHPVLLLLCVLDREVKGVNTVISSASVSKI
DFCFQTLRLAVGDASGLVRLYDFKHSDMGNFHVVTDAKSEVHELAQGQGPTCRAVLKLLD
VRVRAIEFVNHGAKLVVGYENAKVAVLDMTSLSVLFLSDSASAGCSPLVTLITKRFVQSD
SNSKSPKQSELAEKRMEELMFILTEDAKIYVIDGGNGKTYGSGPLHLKKVSTAISMYVIE
NNIPFSYVISKQPESSKDDAASNEPSQEMTTRDLSDTVPFLENDSSRKYFEESFILLCCK
DSIRTYATKSVVHGDNKSVCKVKLDKPCCWTTTLVKDGKACALLLLFQTGDIEIRSLPDL
ELLERTSLMSVLRWNFKPNMDRAMSSMENGHIILANGSELALVSLLASENDFRIPESLPS
LHDEVLAAAADAAMKFSTQKKKQGGGPNILGTLVKGFKAGKTNQNMDFSQMTQSNFSHLE
GVFMKNPLHSELSPTKEVLEELELDIDDIEIDDPVPVASTSSHNTQNSKRGTEREKLLDS
VGDDAKPRPRTREEIIAKYRKTGVQDASSAAGQARDKLLERQEKLERINRRTEELRSGAE
DFASLANELVKVMENRNRKWWQI
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgaagaagctttttcagaaagctactcaatatcatcataatcatcatcaccag
acaaatggaagtggtttaacagcaagtgacctgaatgttcgtgctactgtacattatggt
atcccgtcaaccgcatcaattcttgcagtagactccgtccagcgcctattggctattgga
acattggatggtaggataaaagtgattggtggggacaatattgaaggtctcttgatttct
ccaaagcagttgccatacaaatatctagagttccttcaaaatcagggttttcttgtcagc
atcacaaatgaaaatgatattcaggtttggaatctcaaaagcagatctgtagcttgtgat
ttgcaatgggaatcaaatataactgccttttcagttatcaatggctcttccttcatgtat
gttggagatgaatatggaacaatctcagttttgaagttccatgttgagaacagagagctg
ctgcaactgccatatcagatcatatggagttctctttctgaagcaactagttttccatat
tcagatcatcaaccagttgttggaattctcccgcaaccttttacatcgggaaatagatta
ttgattgcttacgagtgtggtttaattatactatgggatgtcgtcgaagcccatgttatc
attgtcaaaggtgataaagatctccatttgaaggatggtgcttttaaaaagaacgcagat
tccagctctcctaatgatctattgcagcaccaattcgaggagaaagaaataaccacactt
tgctgggcatccattgatggatccattcttgctgctgggtacatagatggagatattctg
ctttggaaaatgtcaaaatcgtctgcaagcaaaggtcaggaagccggaccatttgataat
gttgttaagctacagctgtcttctgttgaaaagaggcttccaattattgtcttacactgg
tgggcaaacagtaaatcccagaataatagcgatggccatctcctcatttatggcggtgat
gaaataggatccgatgaagtcattacgatccttacacttgagtggtcgtctggaatagag
actttgaaatgtgttggtcgtgttgacctcactcttagtggctcatttgcagatacgatc
ttattaccaactacaggggcaacaacacctgatggaaaagctgctttatttgttttgatg
agccctggacaactaaacctttttgattgttcaaccttggccgacttggtatccaaagag
gagaaaaaagtatctctatcagctaaggattttcctgtagaattgccaactgttgatcct
tccatgacagcgacaaagcttacccagttgcattcagatggaaacttaacggagcttctg
caagagttcttcgcagcaacatcatctggggctagcagatggcccttgactggaggggtg
tataatcatacttctcgagctgagactaacaggattcagagagtttttatagcaggttat
caggatggatctgtaaggatgtgggatgccactcatccggtcctcctcctcctttgtgtc
ttggatagagaggttaaaggtgttaatacagttatatcaagtgcttcagtttcaaaaata
gatttctgcttccagacattaagattggcagttggggatgcaagtggtctggtgcgtctt
tatgatttcaaacatagtgatatgggaaacttccacgttgttactgatgctaaaagtgaa
gttcatgagttggcacaaggtcaaggacctacttgcagagctgttctaaagcttctcgat
gttcgagtccgagcaattgagtttgtaaatcatggagccaaacttgtagttggatacgaa
aatgctaaggttgcagtgcttgatatgacttcattatcagtattgttcttgtcagactcc
gcatctgctggttgctctccactggtcactctgattacaaagagatttgtgcaaagtgac
agtaatagcaaaagcccaaaacaatcagagcttgcagaaaagcgtatggaggaactcatg
ttcattttaactgaggatgcaaagatatatgtaattgatggtggtaatggtaaaacgtat
ggttcagggcccttgcatttaaagaaagtgtcgactgcaatttctatgtatgtcatagaa
aacaacatcccattttcttatgtaattagcaagcagccagagtccagcaaggatgatgca
gctagtaatgagccttcacaggaaatgaccactcgtgacctaagtgatacagttcccttc
ctagaaaatgactcctccaggaaatactttgaggagtcctttatcctactttgctgtaaa
gattcaatacgcacttatgctacaaaatctgtagttcatggtgataacaaatctgtttgc
aaagtgaagctcgacaagccttgttgttggactactactcttgtgaaagatgggaaagct
tgtgcgctattattactctttcagactggggatatcgagattcgatctttgcctgatcta
gagttgctggagcgaacttctttaatgtcggttttaaggtggaatttcaaaccaaatatg
gacagggcaatgagttccatggagaatggccatattattctggcaaatggttctgaactg
gctttagtgtccctattagccagtgaaaatgatttcagaattccagaatctttgccgtct
cttcatgatgaagtgctcgcagctgcagcagatgctgccatgaaattctccactcagaag
aagaaacagggtggggggccaaatattttaggtactctagttaaaggatttaaagcagga
aaaacaaatcaaaatatggatttcagtcagatgacgcagtcaaactttagtcatctggaa
ggtgtttttatgaagaacccactccactcagaactgtccccaactaaggaagttctagaa
gaactggagctcgatatagatgatattgaaatcgatgaccctgtccctgtggcttctact
tcatctcacaacacacaaaatagcaaaagaggaactgaaagagaaaagttgcttgattct
gtgggtgatgatgccaaacccagacctaggacacgtgaagaaatcattgcaaaatataga
aaaactggggtccaggatgcatcatcagcggctggacaagcaagagacaagcttctagaa
cgccaagaaaaactcgagagaatcaaccgacgaactgaagaactacgcagtggggctgaa
gactttgcatcattggcaaatgagcttgttaaggtaatggaaaatcgcaatcggaaatgg
tggcagatatga
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integrated database retrieval system
