Solanum lycopersicum (tomato): 101248658
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Entry
101248658 CDS
T02665
Symbol
TAPG5
Name
(RefSeq) polygalacturonase 5 precursor
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101248658 (TAPG5)
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101248658 (TAPG5)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
101248658
NCBI-ProteinID:
NP_001332848
UniProt:
O22313
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Position
12:complement(67733939..67735375)
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AA seq
387 aa
AA seq
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MSPLAIFFFFFFNLSLAKNTIYNVQNYGAKSNGKIDSSKAFLSAWGSACASTSASTIYVP
RGIYLIRKIYFNGQTCKSNAITIRIDGTLLAPSDYNVIGNDGNWITFENVNGVSIYGGIF
DGQGASLWTCKKSQKNCPIGTTALAFYNSNNIVMNGVIVQNSQMFHILVDGCHNAMIQGV
KVLAPGNSPNTDGIHVQSSSGVSIRNSNIGTGDDCISIGPGNSNLWIEGIACGPGHGISI
GSLGWESKEQGVQNVTVKTVTFTGTQNGVRVKTWARPSSGFVRHVLFQHIVMSNVQNPII
IDQNYCPNHESCPHQGSGVKISDVTYQDIHGTSATEVAVKLDCSKTNPCSGITLDNVNLS
YKNGRAESSCVNAAGKASGFKELTSCL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccttagcaattttcttcttctttttcttcaacttatcattagcaaaaaacacc
atttacaatgtccaaaattatggagcaaaatccaatggaaaaatagattcatcaaaagca
tttttaagtgcatggggatcagcatgtgcttctacgagcgcgtccactatttatgtgcca
cgtggaatttacttgattcgtaaaatatatttcaatggtcaaacatgcaaaagtaacgct
attactatacgtatcgatggaactctcttagctccttctgattataatgtgattggcaat
gatggaaattggataacatttgaaaatgtcaatggagtttctatctatggtggaatcttt
gatggtcaaggtgctagtctttggacttgcaaaaaatcccaaaaaaattgccctatagga
actacagcactagctttttacaactcaaacaacattgtaatgaacggagtaattgtacaa
aatagccaaatgttccatattttagtagatggttgccataacgcgatgatacaaggagtg
aaggtgttagccccaggaaatagcccgaatactgatggaattcatgtacaatcatcttca
ggagttagtattaggaactcgaatattggtactggagatgattgtatctctattggccct
ggaaactcgaacttatggattgaaggcattgcttgtggccctggccatggaattagcatt
ggaagcttaggttgggaatcgaaagagcaaggagtacaaaatgtgacagttaagacagtt
accttcacgggtacacagaatggtgtgagggtaaaaacttgggcaaggcctagtagtggc
tttgttagacatgttctgtttcaacatatcgttatgtctaacgttcaaaacccgataatc
atagaccaaaactactgtcctaatcatgaaagttgtcctcatcagggctcgggtgtgaag
ataagtgatgtaacgtatcaagacatacatggaacatccgctacagaagttgcagtgaaa
ttagattgtagcaaaacgaatccatgttctggaataacactagacaacgtaaatcttagt
tataaaaatggtcgcgctgaatcttcatgtgttaatgctgcaggaaaagcttctggtttc
aaagaactcactagctgtttataa
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