Solanum lycopersicum (tomato): 101248731
Help
Entry
101248731 CDS
T02665
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
101248731
Transcription factors [BR:
sly03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101248731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
101248731
NCBI-ProteinID:
XP_004249492
LinkDB
All DBs
Position
10:complement(63029089..63120633)
Genome browser
AA seq
493 aa
AA seq
DB search
MMSGDVFSFPSSVKAVLPHHHQELQTANPNPKPNTSSKKRRNLPGTPDPDAEVIALSPKS
LMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKLEQVKKKVYICPEKTCIHHD
PSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFS
RKDSFITHRAFCDALAEESSRITSVGATNLINFPNTATLLNQQQANLHGGFAGCRPDFGS
YTTGNNNSLHQQQQQKPRLSLWLDQQAANHNNPLQISSSSNLFDSSITGGFQEMIQMQSQ
NVFGSSNSTSANFSIAEAYNSLYSDSQNSQLTKQNSTTPMSATALLQKAAQMGSTKSNQS
TFFSNNFSKLNSSSSSSPNTPTFTSLQSCETTDQIFAKKSEDYTTSLLQSNNGLFGCPNF
TSSGINKSINLDEAIMQTVGMHNTQAVSMNGMDNCLTRDFLGIKHEGNCQFLPQEIVKFA
SMNSSAMGLSHLQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggagatgtgttttcatttccttcttctgttaaagcagtacttcctcatcat
catcaagaacttcaaacagcaaaccctaaccctaaacctaatacttcttccaaaaaaaga
agaaatcttccaggaacaccagatccagatgctgaagttattgcactctcaccaaagtca
ctcatggcaacaaacagattcatatgtgagatttgcaataagggttttcaaagggaccaa
aatttgcaacttcatagaagaggacacaatcttccatggaagctaaagcaaagaaacaag
ctagaacaagtgaagaagaaagtgtatatatgtccagaaaagacatgtattcaccacgat
ccatcgcgtgcacttggcgacctaactggaattaagaaacattttagtagaaaacatgga
gaaaagaagtggaaatgtgaaaaatgttcaaagaaatatgcagttcaatcagattggaaa
gctcatagtaaaacttgtggaactagagagtacaaatgtgactgtggcacactcttttca
agaaaggatagttttatcacacacagagctttctgtgatgctttagctgaggagagttca
agaatcacatcagttggggctaccaatttgatcaacttcccaaatactgcaactttattg
aaccaacaacaagcaaatttacatggcggattcgcaggatgtagaccagattttggtagt
tacacaactggtaataacaattcacttcatcagcagcagcagcaaaaaccaagattatca
ctatggttagatcaacaagcagctaatcataataatcctcttcaaatatcttcaagttcg
aatctttttgacagttcaatcacagggggtttccaagaaatgatccaaatgcaatctcaa
aatgtatttggatcatctaattcgacatctgcgaacttttcaatagctgaagcatacaat
tctctgtattccgatagtcaaaacagccaattaaccaaacaaaattcgaccacaccaatg
tctgctactgcacttctacagaaagcagcacaaatgggctctacaaaaagcaatcaatca
actttctttagcaacaatttcagcaaactgaactcttcttcttcatcttccccaaataca
ccaacttttaccagtttacagagttgtgaaacaacagatcaaattttcgccaagaaatct
gaagattacacaacttcgttgttacagagcaacaacgggctatttgggtgtccgaatttc
acttcttcagggattaataagtcgattaatttggatgaggcaattatgcaaacagttggt
atgcataatactcaagcagtttcaatgaacggtatggataattgtttaacaagagatttt
ttgggaattaaacatgaagggaattgccagtttttgccacaagagattgttaagtttgct
tcgatgaacagttcagctatgggattaagccatttacagtaa
DBGET
integrated database retrieval system