Solanum lycopersicum (tomato): 101248739
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Entry
101248739 CDS
T02665
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03420
Nucleotide excision repair
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101248739
09124 Replication and repair
03420 Nucleotide excision repair
101248739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101248739
03400 DNA repair and recombination proteins [BR:
sly03400
]
101248739
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101248739
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
101248739
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
101248739
TCR (transcription coupled repair) factors
Cul4-CSA complex
101248739
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101248739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF6153
Motif
Other DBs
NCBI-GeneID:
101248739
NCBI-ProteinID:
XP_004233125
UniProt:
A0A3Q7FNF3
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All DBs
Position
2:56404712..56419872
Genome browser
AA seq
802 aa
AA seq
DB search
MSQPNKRSSSLSTPPPSPLSRSMKKAKSQAAAATDDNKNGQQQQQHHHHHHKDEPCVSMI
QYSGGGVTSNLSRKKATPPQPPKKQLVIKLNKAKPTLPTNFEENTWATLKSAISAIFLKQ
PDPCDLEKLYQAVTDLCLHKMGGSLYQRIEKECEAHIVAVLQSLVGQSEDLVVFLSVVQR
CWQDFCDQMLMIRGIALYLDRTYVKQTPNGHSLWEMGLQLFRKHLCLASEVEHKIVFGLL
QMIESERLGEAVDRALLNHLLKMFTALGIYAESFEKPFVERTSEFYAAEGVKYMQQSDVP
DYLKHVELRLHEEHDRCLHYLDSSTRKPLISTTERQLLERHVAAILDKGFMMLMDGKRIE
DLRRMYSLFPRVEALESLKQTLSLYIRKNGQSIVHDDEKDKDMVSSLLEFKASVDTIWEE
SFSKNEAFGNTIKDAFGHLINVCENRPAELIAKFLDEKLRAGNKGTSEEELEGILDKVLV
LFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDI
ELSKEINESFKQSSQARKKLPTGIEMSVHVLTTGYWPTYPPMDVRLPHELNIYQDIFKEF
YLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQAVVLMLFNDAEKLSFLDMMEAT
RIEDKELRRTLQSLACGKVRVLQKIPKGRDVEDNDTFVFNDQFTTPLYRIKVNAIQMKET
VEENTNTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPVKPADLKKRIE
SLIEREYLERDKNNPQVYNYLA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaccgaacaagcgatcttcttccctgagtacaccaccaccatctccgctttcc
cgttcaatgaagaaggccaagtctcaggccgcagcagctactgatgacaacaagaatggc
cagcagcagcagcagcaccaccaccatcaccacaaagacgaaccttgtgtgtccatgatc
caatattcgggtggtggggttacttccaatttgtctcgaaagaaagctacccctccacag
cctcctaagaagcagctcgtcattaagctcaataaagcaaaacctacgctcccaacaaat
tttgaagaaaatacttgggcaactctgaagtcggctatcagtgcaatattcttaaagcag
cctgatccttgtgacttggaaaagctttatcaggctgtcactgacctgtgtctgcacaag
atgggtggaagcttataccaacggattgaaaaagagtgtgaggcacacatagttgcagta
ttgcagtccttagttggccaaagtgaagatcttgttgtttttctatcagttgttcagagg
tgctggcaggacttctgtgatcagatgttgatgatccgtggtatagcgttgtatctagac
agaacatatgtgaaacaaaccccaaatggccattcattgtgggagatgggtttgcagctt
ttccgcaaacatctttgtctagcttcagaagtagaacacaaaattgtctttgggctcctt
cagatgattgagagtgaaagattaggtgaggccgttgatagagctcttcttaaccatctt
ttgaagatgttcactgccttaggaatttacgcagagagctttgagaagccatttgttgag
cgcacttctgagttttatgctgctgaaggtgtcaaatacatgcaacagtcagatgttcca
gattacttgaagcatgtggagttaaggttacatgaagaacatgataggtgcttgcactac
ctggattcaagtacaagaaaaccactaatatcaactacagagaggcaacttttagaacga
catgttgctgcaatacttgacaagggtttcatgatgctgatggatggtaagcgtattgag
gatcttcgaagaatgtattcactattccctagggtagaggcgcttgaatcgttgaagcaa
actcttagcttgtacatccgaaaaaatggtcaaagcattgtgcatgacgatgaaaaagat
aaagatatggtatctagcctgttagaatttaaggcatccgttgatactatatgggaagaa
agtttttctaaaaatgaagcatttggtaacactatcaaggatgcgtttggacatctcata
aatgtctgtgagaatcggcctgccgagctgattgctaaatttctggacgagaagcttcgt
gctggaaataagggtacttcggaagaggaattggagggtatacttgataaagtcttggtt
ctgttcaggtttatacagggtaaggatgtatttgaggcattctacaagaaagatctagca
aagagattattgttgggaaagagtgcttcaatagatgcagagaagtccatgatctctaag
ttgaagactgaatgtggtagtcaattcactaacaaattggaaggaatgttcaaggatatt
gaattgtcaaaagagataaatgaatcctttaagcaatcttctcaagccaggaaaaaactc
ccaacaggaattgagatgagtgttcatgtattaaccacagggtactggccaacttatccg
cccatggatgttcggcttccccatgaactcaatatctatcaggatattttcaaggaattc
tacttgagcaaatacagcggtaggcggttgatgtggcaaaattctttgggacattgtgtt
ctaaaagcagagtttcccaagggtaaaaaagagctggcagtgtctctgtttcaggctgtt
gttttaatgctttttaatgatgcggaaaagcttagctttctagatatgatggaagcaact
cgaattgaggataaagagctcaggagaactttacagtctcttgcatgtggtaaagttcgt
gttctccagaagattccaaaaggaagagatgtggaagacaacgatacctttgtgttcaat
gatcaatttactactccactctatcggataaaggtaaatgccattcagatgaaggaaaca
gttgaggagaacacaaacaccacagaaagagtattccaggaccggcaataccaggttgat
gctgctatcgttaggataatgaagaccagaaaagtgctgagtcatacccttttgataact
gaactctttcagcagcttaaattccctgtgaaaccagctgacttgaagaaaaggattgaa
agcctcatagaaagggagtatctggaacgagacaagaacaatcctcaagtttacaactat
cttgcctag
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