KEGG   Solanum lycopersicum (tomato): 101248847
Entry
101248847         CDS       T02665                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 isoform X2
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101248847
   03400 DNA repair and recombination proteins [BR:sly03400]
    101248847
Enzymes [BR:sly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101248847
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101248847
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    101248847
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-RING_2 ResIII zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 Rad50_zn_hook zf-RING_5 DEAD zf-RING_UBOX zf-rbx1 zf-ANAPC11 Prok-RING_4 DUF5740
Other DBs
NCBI-GeneID: 101248847
NCBI-ProteinID: XP_004252012
LinkDB
Position
12:14702510..14714657
AA seq 882 aa
MVEERDPVDVFMSLDRWPLSPLEDEEETDTVAAREMYMVGFVIVNVVGLQYYTGSISGRE
IVGLQREPLNQYDSNAIKVLNTRSVQVGHIERSAAMVLAPLLDANVITIDGIVPKVARQG
NRYKLPCQVHIFARFEAFEIVKSAITNGGLYLIGENNPSFTLSEAQVVKEKRSTLEGRDV
DEIFKLLDDKVSKKEELKPLEPPKNIIKSKLLLHQNEALWWLVQREISEELPPFWEEKEG
NYVNVLTNYSTDKKPEPIRGGIFADDMGLGKTLTLLSLIALDKCGDVISSIKSGHLSSQR
DDGLDEEEDTWAASFSKRNRRGTDSRNTDISRKKQKTEQIHTLHVKGKTVFSPDRRSANS
NSGPTLVVCPPAVFSTWTSQIEEHTKPGSLKSYIYYGERTGDASELENYDIVLTTYSILA
SEDTWIDSPIKKIEWWRVILDEAHVIKNANAQQSRAVNNLKANRRWAVTGTPIQNNSFDL
YSLMAFLRFEPLSIKSYWNSLIQRPLAQGDEKGVSRLQVLMSTMSLRRTKEKALTGLPSK
SIETFVVELSGDEREIYDQMESEAKKIVNQYISSDSSMKNYWTVLSVIVRLRQICVDSAL
CPADLRSLLPSNKIGDVQSNPQLLEKMLSALQDDEGIDCPICIFPPTNGVITCCGHIFCK
SCILKTIKRAKACCPLCRHPLTESDLFICPPEASNAANSGSSSTASSKVIALLKLLVASR
DESPGRKSIVFSQFRKLLLLLEEPLKAAGFKILRLDGSMNAKKRCQVIKEFEIPAPEGPT
ILLASLKASGAGINLTAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEDVKIVRMIARSTI
EERILELQEKKKLLARKAFMKKSSQDQREISVNDLRTLMHLL
NT seq 2649 nt   +upstreamnt  +downstreamnt
atggtggaagagagagacccagttgatgttttcatgagtcttgaccggtggcctttatcg
ccgcttgaagatgaagaagaaactgacaccgttgcagcgcgggagatgtatatggtgggt
tttgtgatcgtcaatgttgtgggtcttcagtattatactggttcaatcagtggaagagaa
attgttggacttcaacgtgaaccgctgaatcagtatgattcaaatgctataaaagtgctg
aatactcgttctgttcaagttggacacattgaacgctccgccgctatggttttagcaccg
cttttggacgcaaatgtcatcaccattgacggaattgttccaaaggtagctcgtcaagga
aacagatacaaacttccctgtcaagttcacatctttgcaagatttgaagcatttgaaata
gtaaaatcagcaattacaaatggtgggttgtatttgattggtgagaacaatccgtcattt
acactttcagaggcgcaggtagtgaaggagaaaagaagtacactagaaggaagggatgtt
gatgagatatttaagctgttggatgacaaagtcagtaaaaaggaagaactgaaaccatta
gagccacccaaaaatataataaagtcaaagcttcttctgcaccagaatgaagcattatgg
tggttggttcagagggagatatctgaagaattgcctcctttttgggaagagaaagagggt
aattatgtgaatgtcttgacaaattactctacagataaaaaacctgaacctatacgaggc
ggaatatttgcagatgatatggggttggggaagacactaaccctcctttctttgattgct
ttggataaatgtggtgatgttatttcttcaatcaaaagtgggcatctaagttctcagaga
gatgatggattagatgaagaggaagacacatgggctgcttcatttagtaaaaggaataga
aggggaacagacagtagaaacactgacatttcgcggaagaagcaaaagactgaacaaata
cacactctacacgtgaagggaaaaacagtttttagtcctgacagacggtctgccaattca
aattcagggccgacattggtcgtttgtccaccagctgtattctcaacatggacctcacag
attgaggagcacacaaaaccaggttcgctgaagtcatatatatattatggggagcggact
ggagatgccagtgagctggaaaactatgacatagttttaactacttatagtattctggca
agtgaagacacatggatagattctcctatcaaaaagatagaatggtggcgagttatcttg
gatgaggcgcatgtcattaagaatgcgaatgctcagcaaagtcgagcagttaacaatttg
aaagctaatcgaaggtgggcagtaacaggaacaccaatacaaaataactcattcgatttg
tattccttgatggcatttttgagatttgagcctctgtctattaaatcctattggaacagt
ttgatccaacggccccttgcccagggagatgagaagggggtatccaggctacaggtgctt
atgtcaacgatgtcgttaagaaggacaaaagaaaaggctcttactggtttgccatcaaaa
tctatcgagacttttgttgtggaactctctggagatgaaagagaaatttatgatcagatg
gaatcagaagctaagaagattgtcaatcaatacatctcttctgatagttcaatgaaaaat
tattggactgtgctgagtgtaattgtacgacttcgacagatctgtgtagattcagcgttg
tgtcctgcagatctgagatctttgcttccatcaaataaaattggagatgtgcaaagcaac
ccacagttgttggaaaaaatgctctcagcgctgcaagatgacgagggcattgattgccca
atctgcatttttcctcctaccaatggtgtcattacttgttgtgggcatattttttgcaag
tcatgcattttgaagaccataaaacgtgccaaggcttgctgcccactttgccgccatcct
ctgacagagtctgatctatttatctgcccacctgaagcatctaatgctgcaaatagtgga
agttcatccactgcatcatccaaagtgattgcactcctaaaacttcttgttgcatcaaga
gatgaaagccctggcagaaaatcaattgtgttctctcaattcaggaagttgttgctccta
cttgaagagccgcttaaagcagctggttttaagatattgcgcttagacgggtcaatgaat
gcaaaaaagagatgccaggtcattaaagagtttgaaatcccagctccggaggggcctacc
atcttgcttgcaagtctaaaagcttcaggtgctggaataaatcttacagctgcttctaga
gtctatctaatggaaccttggtggaatcccgcagttgaggagcaagctatggacagagtc
catagaattggacagaaggaagatgtgaagattgtgaggatgattgcacgaagcaccatt
gaagaacggatactggaactgcaggaaaagaagaaactgctggcgaggaaggcttttatg
aagaagagttcacaagatcaaagggagattagtgttaatgatcttcgtaccttgatgcac
cttttataa

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