Solanum lycopersicum (tomato): 101249027
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Entry
101249027 CDS
T02665
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1-like isoform X1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101249027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101249027
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
101249027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Pkinase
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
WD40_like
T2SSM
Motif
Other DBs
NCBI-GeneID:
101249027
NCBI-ProteinID:
XP_004248447
UniProt:
A0A3Q7J7I6
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Position
10:4268290..4277777
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AA seq
1019 aa
AA seq
DB search
MDKSKEEADANDVGANVLSRTRECDSGEPSMGKCTSTSHELPEGSTSASSGMLESDGMNR
NVTSMKGPQLHGTSSYSLNSSRLTLEKLCSYKISEPASLRCSNSQKTIQKPQIQWQRFYQ
LGSGSRSLKGDGDPSSTDKAVQQLSSKELPRINLLALKMLKQASDKDIKGGSNAESSQST
EDHNLIIPRNRLLPGSSQSKLLSTSSFSHFFANRSLKTKDVLPKGPALHKEVHIASTLQN
KNDFEQASTGMVSSDVFLKQGANSNQASFSRSDHQRPTSTYNGFTLREWLNSTGSQINKA
ERIHIFRQIVKLIDIAHSEGNAFQDIRPSCFILLSPNGVKYIGSSVQIDSMYAVSRNTNG
KRPSDMEMHANSNLGIKLQKVNVDVGLIRQQPESNARSCSRDEGTSFQAGCLLESDINQL
EKKWYTCPEELHHESLASSNIYSLGVLFFELLCCFESPAAHSTAMLNLQSRILPPNFLCQ
NPKEVGFCFLLLHPVPSSRPTTREILQSELIIGAEEVCKIDGVPSFIEKDDDPDSDVLLY
FLVSLQEEKQNDTSKLLQRIECLEADIKDVEKREVLRHSDWVETDFNNMRQGSYLKHLNS
ADSISRSFSIPNMRNEKLMKNISQLESAYFCMRSQIQLAENDTIGRTDTDLLTSRDRLFQ
VSAKEAEPILKSVDRVGAFFEGICKYARYCKFEEYGTLRNGDLLNSINVICSLCFDYEED
YIAAAGVSKKIKIFEFASLLNESADLQYPVAEMSNISKLSCVSWNKYMRNYLASTDYDGV
VKMWDASTGQEFSQHTEHQKRAWSVDFSQVNPTKFATGSDDCSVKVWNINERSSVDTIWN
PANICCVQFSAYSSHLLAFGSADYKIYCYDLRHTRIPWCTLTGHEKAVSFVKFLDYGTLV
SASTDNTLKLWDLKRTSLEGLSSNACSLTFKGHTNEKNFVGLSVLDGYIACGSESNEVYA
YHRSLPMPITSYKFGSVDPSSGNDGESNGKFVSSVCWRRKSNMVVAANSTGCIKLLRLV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcaaaggaggaagcagatgcaaatgatgtaggtgcgaatgtgctatctaga
acgagggagtgtgattctggtgaaccatcaatggggaagtgtacatctaccagtcatgag
ttgccagagggatcaacttctgccagttcagggatgttggagagtgatggaatgaacaga
aatgtaacgtccatgaaggggcctcagctccacggtacaagctcttactcattgaatagt
tcaaggctcactcttgaaaagttgtgtagttacaaaatttctgagccagcttctcttaga
tgctccaatagtcaaaaaaccattcagaaaccacaaattcagtggcaacgtttctatcaa
ttggggtctggctctagaagtttgaagggagatggagatccttcatccacggacaaggct
gttcagcaattaagttccaaggagttgccaagaataaatttacttgcgctgaaaatgctg
aagcaagcatccgacaaagatatcaaaggaggctctaatgcagagtcttcccaatcaaca
gaagaccataacctaattattccaagaaatagattacttccgggaagtagtcaatcaaaa
cttttatccacttctagcttttctcatttttttgctaaccgatctcttaaaaccaaagat
gttttaccaaaaggacctgcacttcataaagaagttcatattgcctctactctgcagaat
aagaatgacttcgagcaagcctccacaggaatggtatcatctgatgtttttttaaagcaa
ggtgctaattctaatcaagcatctttcagtcgtagcgatcaccaaagacccacttcaact
tacaatggatttaccttgagagagtggttaaactcgacgggatcacagataaacaaagct
gagaggattcacatattccggcagattgtgaagttaattgatattgctcactctgaagga
aatgcattccaggatatacggccttcctgtttcattttactgtcacctaatggtgttaaa
tatattggttcatctgtccagatagactccatgtatgctgtgagccggaatactaatggg
aaaaggccatccgacatggaaatgcatgctaatagtaacttgggtataaagctacagaag
gtcaatgtggacgtgggcttgattagacagcagcctgaaagcaatgctcgttcttgttct
cgtgatgaaggcacatcatttcaggcagggtgtctactggagtctgatattaatcaatta
gaaaagaagtggtacacttgtcctgaagaactccatcacgaaagcctagcatcgtctaat
atctacagtctcggggttcttttctttgagttgctctgctgtttcgaatcacctgcagca
cattccacagccatgttgaatttgcaaagtcgcattctccctccaaatttcctttgtcaa
aatcccaaggaagttggcttttgctttttgctgcttcatcctgtgccttcttctcgtcca
acaacaagggaaatcctacagtctgaattaattattggagctgaagaagtatgtaaaata
gatggtgtcccatcattcattgagaaggatgatgaccctgattcagacgtcttgctctat
ttcctagtttcactgcaggaggaaaaacagaatgatacctccaagttattacaaagaata
gagtgcctagaggctgatatcaaggatgttgagaaaagggaggtccttagacattcagat
tgggtggaaactgacttcaataatatgcggcaaggatcctacttaaaacatctcaattcc
gctgactctatttctagatcgttttcaattccaaatatgcgcaatgaaaagctgatgaag
aatatttctcagcttgaaagtgcatacttctgcatgaggtcccaaatccaacttgcagaa
aatgatacaataggtcgaacagacacggatttgttgacgagtcgtgacagattgttccag
gtttcagcaaaagaggcagagccaattttaaaatctgttgatcgtgttggagccttcttt
gaaggtatttgtaaatatgctcgctactgcaagtttgaggaatatgggacattaagaaat
ggtgatcttctcaactctataaacgtgatctgctccctctgttttgattatgaagaggac
tatatagctgcagctggtgtctcaaagaaaattaaaatctttgaatttgcttcacttttg
aatgaatctgcggatcttcaatatcctgtggctgagatgtcaaacatatctaagcttagc
tgtgtttcgtggaataaatatatgagaaactatctggcttcaactgactatgatggcgta
gtcaagatgtgggatgcaagcacaggtcaagaattttcacaacatacagagcaccagaag
agggcttggtctgttgatttttctcaagtgaatccaacaaagtttgccactggaagtgat
gattgttctgtaaaagtgtggaatattaatgagaggagttctgtggatacgatctggaat
cctgccaacatatgctgtgtgcagttttctgcttactcctctcatctgttggctttcgga
tctgctgattacaaaatttactgctatgatcttcgccatactaggattccgtggtgcaca
ttaactggacatgagaaggctgttagctttgtaaaattcttagattatggtaccctggtt
tctgcatccacagataacacgctaaagctatgggacctaaagagaacaagtttggaagga
ttgtcctcaaatgcttgcagcttgacattcaagggacacaccaatgaaaagaactttgtg
ggattatcagttttggatgggtacattgcatgtggttctgaatctaatgaggtatatgct
tatcatagatctctaccaatgccaattacctcttataaatttggatctgttgatcctagc
tctggcaatgatggtgagagtaatgggaaatttgtttcaagtgtttgctggagaagaaaa
tctaatatggttgttgcggcaaactcaactggatgtataaagctgttacgtttggtatga
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