Solanum lycopersicum (tomato): 101249153
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Entry
101249153 CDS
T02665
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101249153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101249153
04121 Ubiquitin system [BR:
sly04121
]
101249153
03036 Chromosome and associated proteins [BR:
sly03036
]
101249153
03400 DNA repair and recombination proteins [BR:
sly03400
]
101249153
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101249153
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101249153
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101249153
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101249153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
BRCT_2
BRCT
zf-HC5HC2H_2
PHD_NSD
RTT107_BRCT_5
PTCB-BRCT
DUF7963
Motif
Other DBs
NCBI-GeneID:
101249153
NCBI-ProteinID:
XP_069148446
LinkDB
All DBs
Position
12:complement(57823698..57848336)
Genome browser
AA seq
434 aa
AA seq
DB search
MSLESHDHILQRCPSSEIVADSNCNWEYKICESPNVVQPKAVIDQHPPKASVCAFCYSAK
TTEKTGPFLYFANGREVVGNVTSLSKVICVHSKCIEWTPQVYYEGEIIKNLDTELARATK
LKCSSCGMKGAALGCYMTSCRRSYHVPCAFEIQDCQWDMENFVMLCPVHKSVKFPSEKSK
SIEHIRREMHPKASPLTTEQLTFWARSSDGPKEWVLCGSALSSEDKYMLVKFDDMCGATA
CKFWRPNVTHVVATTDVKGACTRTMKFLMAILSGKWIPTMDWVKACVAANGPVNEEHYEI
SLVNYGRSGGPKAGRLMASANGPKLFDGFEFYFIGDFMPDYKSDLLDLVEKAGGTVIQSE
EQLVKQNHAAQGTQPSSLVVYNCDLSQGCFEEKIRILLQRLAEAEDLAEQIGSQTVQHTW
ILESIAACKLVPFC
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagcttagaaagtcatgatcatattctccaaagatgccctagttctgaaattgttgct
gattccaactgcaattgggagtataaaatatgtgaatctcctaatgttgttcagccaaaa
gcagttatagatcaacatcctccgaaagcaagtgtttgtgctttctgttattctgctaag
accacagagaaaactggaccttttttgtactttgcaaatggaagggaagttgtgggtaat
gttacttctctttccaaagtcatatgtgtgcacagtaagtgcattgaatggacacctcaa
gtatattatgaaggagaaattataaaaaatttggacaccgagttggcaagagctacaaaa
ctcaagtgtagtagttgtggcatgaagggtgcagcgcttggctgctacatgacgtcttgc
aggaggagttatcatgtgccctgtgcatttgaaatccaggattgccaatgggatatggag
aactttgtgatgctgtgcccagttcataaatctgttaaatttccaagtgagaagtcaaag
tctatagaacatatcaggagggaaatgcatccaaaggcttctcccctaaccaccgagcaa
ttgactttttgggcaagatcatcagatggaccaaaagaatgggttctttgtgggtctgct
ctatcctcagaagataagtacatgttggtgaaatttgatgatatgtgtggtgcaactgcg
tgcaagttctggagaccaaatgtcacacatgttgttgcaacaactgatgtaaagggtgca
tgcaccagaacaatgaaatttctcatggcgattttgagtggaaaatggatcccaactatg
gactgggtaaaagcttgtgttgcagcaaatggtccagtaaatgaagaacattatgaaata
agtctagtcaattatggccgttctgggggccccaaagctggaaggttaatggcctcagct
aatgggccaaagctttttgatggtttcgagttttattttattggagattttatgccagat
tacaaaagtgacctgttagatctagtcgagaaggctggaggcacagtcattcagagtgag
gagcagttggtgaaacagaatcatgctgcacagggaactcagccatcttctctagtcgta
tataactgtgatctatcgcaaggttgctttgaagaaaaaatcagaattttgctgcaaaga
ctagcagaagctgaggatctagccgagcaaatcggttctcagactgttcagcatacttgg
attctggaatctattgctgcatgtaaattggtacctttctgctaa
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