Solanum lycopersicum (tomato): 101249437
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Entry
101249437 CDS
T02665
Symbol
CD4B
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sly03110
]
101249437 (CD4B)
Chaperones and folding catalysts [BR:
sly03110
]
Heat shock proteins
HSP100
101249437 (CD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
AAA_14
AAA_18
NACHT
AAA_28
Mg_chelatase
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
MazE_antitoxin
AAA_23
Motif
Other DBs
NCBI-GeneID:
101249437
NCBI-ProteinID:
NP_001332862
LinkDB
All DBs
Position
12:59056309..59063579
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AA seq
923 aa
AA seq
DB search
MARALVQSTSIPSSVAGERTTKFNGSGKTKRAVTMLCNAQSSSLTLRDFTGLRGCNAIDT
LVRSGQTLQSKVAAATYVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESNEAVG
ASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLP
DKAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQITKEKNEAVRGQDFEKAGELRDREMD
LKAQITALIDKNKEVSKAESEAADTGPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKM
EETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDLDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEI
ELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLANEIKEGDSVIVDVDSD
GNVTVLNGSSGTPSDPAPEPIPV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctagagctctagttcagtcaacaagcatcccatcgtcagttgctggtgaaaggaca
accaaattcaatggatctgggaaaacaaaaagagctgttacaatgctatgcaatgcacaa
tcatcttcacttacactgagggattttacaggattgcgaggatgcaatgcaatagataca
ctagttagatctggccaaactctccaatccaaagtagctgctgcaacttatgtcagacgg
ccacgaggttgccgatttgtaccaaaagcaatgtttgagcgcttcacagagaaggcgata
aaagtcattatgcttgcacaagaagaggccagacgacttggtcacaattttgttggcact
gagcagatcttgttgggtctaattggtgagggaactggtattgctgccaaggttcttaaa
tcgatggggatcaatttgaaagatgctcgtgtggaagtggaaaagataattggaaggggt
agtgggtttgttgctgttgagatcccttttacccctcgtgccaagcgtgttctggaactc
tctctggaggaagcccgccagctagggcataactatattggttcggagcacttgctactt
ggattgctacgtgaaggtgaaggtgtggctgcccgtgttcttgaaaacttgggtgctgac
cccagcaacatccgcactcaggtgatccggatggttggtgagagtaatgaggctgttggt
gctagcgttggaggtggaacttctggccaaaaaatgccaacactggaggagtatggaaca
aatttgacaaaattggcggaagagggaaaattggaccccgttgttggaagacagccgcaa
attgaacgggtcactcaaatcttgggtcggcggactaagaacaacccttgtcttattggt
gaaccaggtgttggcaaaacagctattgctgagggtttggcacaaagaattgcaaatggt
gatgtccctgaaacaattgaggggaagaaggtgataactcttgatatgggattgcttgtt
gctgggacaaaataccgtggagagtttgaggaaaggctaaaaaagctgatggaggaaatt
aagcagagtgatgaaataatactatttatcgatgaagtgcacacattgattggagctgga
gcagcagagggggccatcgatgctgcaaacatcttgaaacctgccctagctcgaggtgaa
ctacagtgtatcggagctactacactggatgaatacagaaagcatattgagaaagatcct
gcactagagaggagattccaaccagttaaggtccctgaacctactgttgatgaaactata
cagattctgaaagggcttcgtgagaggtatgaaattcatcacaaacttcgttacactgac
gaagccttagtggctgctgctcagctctcataccagtacatcagtgaccgatttctgcct
gacaaagcaattgatttgattgatgaagctggttctcgtgttcgacttcgccatgctcag
ctccccgaggaagcaaaagagctcgagaaagaacttcgtcagataacaaaggagaagaat
gaagctgttcgtggtcaagatttcgaaaaggctggggaattacgtgatagagaaatggat
ctgaaggcacagatcacagccctcatagacaaaaacaaagaggtgagcaaggctgaaagt
gaggctgcagatacaggtccacttgtgacagaagcagatattcagcacatcgtctcttct
tggactggtatccctgttgagaaggtctccactgacgaatctgaccgtctcctaaaaatg
gaagaaacacttcacacacgaatcattggccaggatgaagctgtcaaagccattagtcgc
gctattcgacgtgcacgagttgggctcaagaatcccaacagacctattgctagtttcatc
ttttccggtcccactggtgttgggaaatcagaactggcaaaggcactggctgcatattac
tttggttctgaagaagcaatgatccggcttgatatgagtgagttcatggaaagacacact
gtctctaaactcattggatccccccctggttatgttggttacacagagggtggtcaattg
actgaagctgttaggcgtcgaccttatacagttgtgctctttgatgagattgagaaggct
catcctgatgtcttcaacatgatgcttcaaattcttgaagatggaagattgacagacagc
aagggtagaactgtagatttcaagaacacacttctcatcatgacatcaaatgttggaagt
agtgtaattgagaaaggtggccgtcgtataggttttgatctcgaccttgatgagaaggat
agcagttacaatcgcatcaagagcttagtgacagaagaattgaagcagtacttcaggcca
gagtttttgaacagattggatgagatgattgtattccgtcagctcactaagttagaggtt
aaggagatagctgatatcatgcttaaggaggtctttgagaggttgaaagttaaggagata
gaacttcaagtgacagagaggtttagagacagggtggttgacgagggatacaaccctagc
tatggagcacgacctctgagaagagctattatgagacttttagaggacagcatggctgag
aaaatgcttgcaaatgagattaaagaaggtgattcagttatcgtggacgttgattcagat
ggcaatgtgactgtcctcaatggaagtagtggtactccctcggatccggctcctgagcct
atccccgtttag
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