Solanum lycopersicum (tomato): 101249567
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Entry
101249567 CDS
T02665
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101249567
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sly04040
]
101249567
Ion channels [BR:
sly04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101249567
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101249567
NCBI-ProteinID:
XP_004245310
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All DBs
Position
8:59620285..59624744
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AA seq
726 aa
AA seq
DB search
MEFKKAKTVRFYNDGKQNLESSWEKNENHVLEKQLPLYLDGRNVDKVGASKVPKFGKFKV
FPENYVPGKKKILDPGSEIVIQWNRVFLFSCLMALFMDPLFFYLPSVVNRGKSSCMTIDL
NLGISVTCFRTVADVFYLLHVIFKFRTAYVSRSSRVFGRGELVMDKKLIARKYLKSEFFI
DAIAALPLPQIVIWFIIPAIRSSHSDHTNNALVLIVLLQYLPRLYLIFPLSSQIIKAAGV
VTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERYATCWKIACEKELSPLQCSSRFLDCG
TTDHADRITWVNSTQVFSNCYPSNSTIFDFGIFANAVTNNVVSSKFLEKYLYCLWWGLQN
LSSYGQNLTTSTYIWETSFAILIAIFGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTE
EWMRHRQLPQDLQERVRRFVQYKWLATRGVDEESILLALPSDLRRDIQRHLCLDLVRRVP
FFSQMDDQLLDAICERLSSSLSTQGTYIVREGDPVTEMLFVIRGTLESSTTNGGRTGFFN
SITLRPGDFCGEELLAWALLPRSTLNLPSSTRTVRALSEVEAFALHAEDLKFVANQFRRL
HSKKLQHTFRYYSHHWRTWAACFVQAAWRRFKRRKLAKELYRGESLSYAPEDDQSAYESE
CEHEDDQQTKTTPTNSSNVKQNLGVTILASRFAANTRRGVQKMKDMDMPTFQKPEEPDFS
AEPDDD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaagaaagccaagacggttaggttttataatgatgggaaacagaatcttgaa
agttcatgggagaagaatgagaaccatgttcttgaaaagcagctacctttgtatcttgat
ggtagaaatgttgacaaagttggagctagtaaagttcctaaatttgggaaatttaaggtt
ttcccagaaaattatgtacctgggaaaaagaaaattcttgatccaggaagtgaaattgtt
atacaatggaatagggtgttcttattttcttgtttgatggctctcttcatggatccattg
tttttttaccttccatcagtggtgaatagggggaaatcttcatgtatgacaattgacttg
aatcttgggattagtgttacatgttttcgaacagtagcagatgttttctatttgttacat
gtgatatttaagtttaggactgcttatgtttcaagaagttcaagggtgtttggaaggggt
gaacttgttatggataagaaattgattgcaaggaagtacttgaagtctgaattcttcatt
gatgctattgctgctctgcctcttcctcagattgtaatatggttcatcataccggcaatt
agaagttctcattccgatcacaccaacaatgcgcttgtattaatagtcctgctgcaatat
ctgccaagactctatctgattttcccattgagttctcaaattattaaagctgctggagtt
gtcacgaaaacagcttgggccggggcggcttacaatttgctactctacatgttggcaagc
catgtccttggtgcttcctggtacttattgtcaattgagagatatgctacatgctggaaa
atagcttgtgaaaaggagcttagtcctttacaatgctccagtcgttttctcgactgtggt
accacagaccatgcagacaggataacatgggtaaacagcacccaagttttcagcaactgc
tatccttctaactcgaccattttcgactttggaatatttgctaatgcagttacaaacaat
gttgtatcctctaagttccttgagaagtacttgtactgtttgtggtggggtttacaaaat
ttgagttcttacggccaaaacttgaccacaagcacatatatatgggaaacttcatttgcc
attcttattgctatttttgggctagttctgtttgctcatttgattggaaacatgcagaca
tacttacaatctatcactgtgaggcttgaagagtggaggctcaagcgacgagatactgaa
gaatggatgaggcatcgccaacttcctcaggatctacaagaacgtgttagacgttttgta
cagtacaagtggcttgcgactcgaggagtagatgaagaatctatcctgcttgctttacct
tcagaccttcgtcgtgacatccaacgtcacctatgtttagaccttgttcggcgtgttccc
ttcttctcgcaaatggatgatcaactgcttgatgccatatgtgaacgtctgagttcttcg
ttaagtactcaaggaacgtacattgtacgtgagggtgatccagtaactgaaatgctcttt
gttattagaggaacattagagagctcaactacaaatggggggcggacaggcttcttcaac
tcaattactttgaggccaggtgacttttgtggtgaggaactccttgcctgggcgttgttg
ccacgatccactcttaacttgccttcatcaacgagaacagtgagagcgctatcagaagta
gaagcttttgcattacatgcagaggatctcaagtttgtagccaatcaattcagacgtctt
catagtaagaagctacagcacactttccgttattactctcaccactggagaacttgggct
gcctgttttgttcaagctgcttggcgtcgtttcaagaggagaaagctagccaaagaactt
tatagaggtgagtccttgtcttatgctcctgaggatgatcaatcagcatatgaaagtgaa
tgtgaacacgaggatgatcaacaaacaaagactacaccaacaaactcttcaaatgtaaag
caaaaccttggagttacaatattggcatcaagatttgctgcaaacacaaggagaggagtt
cagaagatgaaggatatggacatgcctacgtttcagaagcccgaggagcctgacttttcg
gctgagccagatgacgactag
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