Solanum lycopersicum (tomato): 101249604
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Entry
101249604 CDS
T02665
Name
(RefSeq) chloride channel protein CLC-b
KO
K05016
chloride channel 7
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101249604
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101249604
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sly04040
]
101249604
Protein phosphatases and associated proteins [BR:
sly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101249604
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
101249604
Ion channels [BR:
sly04040
]
Chloride channels
Chloride channel (CLC)
101249604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
DUF7321
Motif
Other DBs
NCBI-GeneID:
101249604
NCBI-ProteinID:
XP_004233300
UniProt:
A0A3Q7F172
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Position
2:complement(54275103..54279279)
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AA seq
784 aa
AA seq
DB search
MEEPRLVEEATANDINGQLNEEERDPESNSLRQPLLKRNRTLSSSPFALVGAKVSHIESL
DYEINENDLFKHDWRRRSRVQVLQYVFLKWSLAFLVGLLTGVTATLINLAIENIAGYKLR
AVVDYIDNRRYLMGFAYFAGANFVLTLIAALLCVCFAPTAAGPGIPEIKAYLNGVDTPNM
FGATTLFVKIIGSIAAVSASLDLGKEGPLVHIGACFASLLGQGGPDNYRLKWRWLRYFNN
DRDRRDLITSGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVILRAF
IEYCKSGKCGLFGKGGLIMFDVSGVSVTYHPVDIIPIALIGIIGGLLGSLYNYVLHKVLR
LYNLINEKGKLHKLLLALSVSLFTSISMYGLPFLAKCKPCDPSIQGSCPGTGGTGNFKQF
NCPNGYYNDLATLLLTTNDDAVRNIFSINTPGEFQVSSLIIYFVLYCILGLITFGIAVPS
GLFLPIILMGSAYGRLLAIAMGSYTKIDPGLYAVLGAASLMAGSMRMTVSLCVIFLELTN
NLLLLPITMLVLLISKSVGDCFNLSIYEIILELKGLPFLDANPEPWMRNITVGELADVKP
PVVTLRGIEKVGRIVEVLKNTTHNGFPVVDEGVVPPVGLPIGATELHGIVLRTHLLLVLK
KKLFLHERRRTEEWEVREKFSWIDLAERWGKIEDVAVTKSEMEMYVDLHPLTNTTPYTVV
ESMSVAKAMVLFRQVGLRHMLIVPKYQAAGVSPVVGILTRQDLRAHNILTVFPHLVKSKS
GKKH
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaccaagattagtagaggaagcaacagcaaatgacatcaatggacaactcaat
gaagaagaaagagatccagagagcaattcattgcgacagcctctactcaaaagaaacagg
accctgtcatccagtccatttgctttggttggagctaaagtctcacatatcgaaagttta
gactatgagatcaacgagaatgatctcttcaagcatgactggagaaggagatccagagtt
caagtattacaatatgtattcttgaaatggtcactggcatttttggttgggcttcttaca
ggagttacagcaacacttatcaatcttgcaattgaaaatattgctggctacaaacttcgt
gctgtagtggactatatcgataacagaaggtaccttatgggatttgcatattttgcgggt
gctaattttgtgctcactctgatagccgcccttctctgtgtgtgcttcgcgcctactgct
gcagggcctggaattcctgaaatcaaagcctatcttaacggtgtagatactcccaacatg
tttggagcaaccacactttttgtcaagatcattggaagcatagcagcagtttctgcaagc
ttagaccttgggaaagaagggccattggttcacattggcgcttgctttgcttccttacta
ggtcaaggtggtccagataattaccgactcaaatggcgttggctccgttacttcaacaac
gatcgggacaggcgagatctcatcacgtctggatcatcatcaggtgtgtgtgctgctttc
cgttctccagttggtggtgtcctatttgctttagaggaagtggcaacatggtggagaagt
gcacttctctggagaactttctttagcacagcagttgtggtggtgatacttagggccttt
atagaatactgcaaatctggcaaatgtggactctttggaaaaggagggcttatcatgttt
gatgtgagtggtgtcagtgttacgtaccatcctgtggacatcattcctattgcactgatt
ggaatcataggtggacttttgggaagcctttataattatgtcctccacaaagttctcaga
ctctacaatctcatcaacgagaagggaaaactacataagcttcttctcgctctgagcgtc
tcccttttcacctccattagcatgtatggacttccttttttggccaaatgcaagccttgt
gatccatcaattcaagggtcctgtcctggcactggagggacaggaaacttcaagcaattc
aactgtccaaacggctattacaatgatctcgctactcttctccttacaaccaatgatgat
gcagtacgaaatattttttccataaatactcccggtgaattccaagtttcatctcttatt
atctactttgtactgtattgcatcttgggactcatcacttttgggattgctgtgccatct
ggtctcttccttccaatcatcctcatgggttcagcttatggtcgtttgcttgccattgcc
atgggatcatatacaaaaattgatccagggttgtatgccgttctcggagcagcttccctt
atggctggttcaatgagaatgactgtttctctttgcgtcatatttcttgagctgacaaac
aatcttctccttctgccaataacaatgcttgttcttcttatatcaaaaagtgtaggagac
tgcttcaacctaagtatttatgaaataatattggagctgaaaggtctacctttcttggat
gccaaccctgagccatggatgagaaatatcactgttggtgaacttgctgatgtaaagcca
ccagtagttacgcttcgtggaattgagaaggtgggacgtatcgtggaggtcctgaagaac
accacacataacggattccctgtagtagatgaaggggtggtaccaccagtggggctgcca
attggggcaactgaattgcacggtattgtcctaagaactcatctacttttggttctcaag
aaaaagttgttccttcatgaaagacggaggacagaggagtgggaagtgagagagaaattc
tcctggattgatttagctgagagatggggtaagattgaagatgtggcagttacaaagagt
gaaatggagatgtatgttgacttgcatcccttgaccaatacaaccccctatactgtggta
gaaagcatgtcagtggctaaagcaatggtgctcttcaggcaagtggggcttcgccacatg
ctcatagtaccgaaatatcaagcagcaggggtatctccggtggtgggaatcttaaccagg
caagacttgagagcccacaacattttgactgttttccctcatctggtgaagtcaaaaagt
ggcaaaaagcactga
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