Solanum lycopersicum (tomato): 101249605
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Entry
101249605 CDS
T02665
Symbol
ORRM4
Name
(RefSeq) glycine-rich RNA-binding protein 4, mitochondrial
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101249605 (ORRM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101249605 (ORRM4)
03041 Spliceosome [BR:
sly03041
]
101249605 (ORRM4)
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101249605 (ORRM4)
mRNA cycle factors
Common to processing body (P body) and stress granule
101249605 (ORRM4)
Spliceosome [BR:
sly03041
]
Common components
Common spliceosomal components
hnRNP proteins
101249605 (ORRM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
101249605
NCBI-ProteinID:
XP_069149550
LinkDB
All DBs
Position
2:53334408..53337334
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AA seq
252 aa
AA seq
DB search
MALFNRIGNMLKQSVSRHTNLELCATRTSLYQAIRSMSSSKLFVGGLSYGTDETSLREAF
SQHGQVIEARVIFDRDSGRSRGFGFVTYTSAEEASSALSALDGQDLHGRRIRVNYATEKR
PGGFGRGSGGGGGFSYGGGAGGYSYGNYGGGGNYGSNNSYPAGGGSYGGDSFGAGYGGGS
SGSYNAGVSASNDFLDNSEFGGSPGTSHNGGEEQLSADQGTESVDNDFTPGVERSSSDDN
DEPKDYANSRSS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggctttattcaatagaattggaaatatgcttaaacagagtgtaagcagacacacaaat
ttggaattgtgtgccactagaacctcactttaccaggctataagaagcatgtcttcttca
aagctttttgttggaggtctctcatatggcactgatgagacctctctgcgagaggcattc
tcccaacatggtcaagtgattgaagctagagttatttttgatcgtgacagtgggagatcc
agagggtttggttttgttacttatacatctgctgaagaagcatcaagtgccctgagtgcc
ttggatggccaggatctccacgggagacggataagggtgaattatgccacagaaaagcgt
cctggaggattcgggcgtggttctggtggtggaggtggatttagctatggtgggggagct
ggaggttactcatatgggaattatggaggtggtggtaactatggtagcaacaacagttac
cctgcaggtggtggcagctatggtggggatagttttggggctggatatggtggtgggagt
agtggaagttacaacgctggtgtttccgctagtaatgacttcttggacaactctgaattt
ggtgggagccctgggacctcgcacaatggtggtgaagaacagcttagtgcagaccaaggg
actgaatctgtagacaatgatttcacaccaggtgtagaaaggagcagcagcgacgacaat
gatgagccaaaggactacgccaactcgaggagttcataa
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integrated database retrieval system
