Solanum lycopersicum (tomato): 101249666
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Entry
101249666 CDS
T02665
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101249666
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101249666
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
101249666
NCBI-ProteinID:
XP_019070761
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Position
8:complement(5397069..5399985)
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AA seq
395 aa
AA seq
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MPKALVTFWCCVFFSFRFIFLNSNASSITYNVLNFGAKSDGKSDATQPFLKAWVAACTSV
KAATIYVPRGKYLIKSITFRGPCKNKITVKIDGTLVAPSDYNALGNSGYWILFIKVNRIS
VIGGTLDGNGAGFWDCRKLGKNCPVGARSITFNWANDVVVSGLTSLNSQLMHLVINSCKN
VMVKNVRIIAPDFSPNTDGIHIQSSIGVIISGTSIQTGDDCISIGPATRNLWMNKIQCGP
GHGVSIGSLARNYNEDGVQNVTLINSVFTGSDNGLRIKSWARASTGFVTNINYQNIMMKN
VDNPIIIDQNYCPNNQGCPSQASGIKINQVTYQNIFGTSTTQVAMNFECSPSNPCSEIKI
QDIKLTYLNNKKAQSICKNIKGNTEGVILPDNCLL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaggctttagtaactttttggtgttgtgtcttcttttcatttagattcattttc
ttgaattcaaatgcatcatcaataacatacaacgtgttaaattttggagcaaaatcagat
ggcaaaagtgatgcaactcaaccttttttgaaagcttgggtagccgcgtgcacctcagtg
aaggcggctaccatttatgttccacgtggaaagtacttgattaagtcgattacttttaga
gggccgtgcaaaaataaaattactgtaaaaattgatggaaccctagtggctccatctgat
tataatgcacttggcaactctggctactggattttgttcattaaggttaaccggatttcg
gtcatcggaggaactcttgatggaaatggagctggattttgggattgtaggaagttaggg
aagaattgtcctgttggagctaggtctataaccttcaactgggcaaatgatgttgtggtt
agtggtttaacatcactcaacagccagttaatgcacttggtgattaatagttgcaagaat
gttatggttaaaaatgtaagaataatagcacctgattttagtccaaatactgatggaatt
catatacaatcttcaattggtgttattattagtggcacaagtattcaaactggagatgat
tgtatatctattggtcctgccacaagaaatctttggatgaacaagattcaatgtggccct
ggacatggtgttagcattggaagtctagctagaaattataatgaagatggcgtacaaaat
gtgacattaattaattcagtgtttactggatctgataatggattaaggataaagtcttgg
gcaagggccagcaccggttttgtcacaaatattaattatcaaaatattatgatgaagaat
gttgataatccaatcattattgatcaaaactactgcccaaacaaccaaggctgtcctagc
caggcttcaggcataaagatcaatcaagtgacataccaaaatatatttggaacatcaaca
acacaagtagcaatgaattttgaatgcagtccaagcaatccatgtagtgaaatcaaaata
caagacataaaacttacttatttgaataacaaaaaagctcaatctatttgcaaaaatatt
aaaggaaatactgaaggagttattttgcctgataattgtttattgtaa
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